U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C33H5.13 CYSTM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183188, updated on 12-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    C33H5.13
    Gene description
    CYSTM domain-containing protein
    Locus tag
    CELE_C33H5.13
    See related
    AllianceGenome:WB:WBGene00016379
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in innate immune response. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See C33H5.13 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (7791704..7792263, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene IntraMembrane Protease (IMPAS) family Neighboring gene putative splicing factor, arginine/serine-rich 6 Neighboring gene Nucleoside-triphosphatase ntp-1 Neighboring gene Shugoshin

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response HEP PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    CYSTM domain-containing protein
    NP_001368445.1
    • Confirmed by transcript evidence
    NP_501288.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7791704..7792263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068887.6 → NP_501288.1  CYSTM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501288.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18410

    2. NM_001380342.1 → NP_001368445.1  CYSTM domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      W6RY45

    RNA

    1. NR_131575.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools