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    MRPL53 mitochondrial ribosomal protein L53 [ Canis lupus familiaris (dog) ]

    Gene ID: 612261, updated on 5-Mar-2024

    Summary

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    Gene symbol
    MRPL53
    Gene description
    mitochondrial ribosomal protein L53
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See MRPL53 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49522699..49525326)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48305344..48307970)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49164289..49166915)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48539822..48542449)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48606586..48609212)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene ladybird homeobox 2 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene coiled-coil domain containing 142 Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene WW domain binding protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    39S ribosomal protein L53, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49522699..49525326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691668.1 → XP_038547596.1  39S ribosomal protein L53, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KN16, A0A8C0QM52
      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48539822..48542449
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499109.1 → XP_038355037.1  39S ribosomal protein L53, mitochondrial

      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48606586..48609212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625739.1 → XP_038481667.1  39S ribosomal protein L53, mitochondrial

      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49164289..49166915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561697.1 → XP_038417625.1  39S ribosomal protein L53, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KN16, A0A8C0QM52
      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48305344..48307970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_850000.6 → XP_855093.1  39S ribosomal protein L53, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KN16, A0A8C0QM52
      Conserved Domains (1) summary
      pfam10780
      Location:20 → 71
      MRP_L53; 39S ribosomal protein L53/MRP-L53
    Nucleotide Protein
    Heading Accession and Version

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