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    DQX1 DEAQ-box RNA dependent ATPase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 475784, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DQX1provided by VGNC
    Official Full Name
    DEAQ-box RNA dependent ATPase 1provided by VGNC
    Primary source
    VGNC:VGNC:40086
    See related
    Ensembl:ENSCAFG00845018690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49476595..49483042)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48259133..48265486)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49118166..49124613)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48493745..48500192)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48560489..48566936)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene HtrA serine peptidase 2 Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene T cell leukemia homeobox 2 Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene ladybird homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DQX1; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DQX1
    Names
    DEAQ box polypeptide 1 (RNA-dependent ATPase)
    XP_038309035.1
    XP_038354997.1
    XP_038354998.1
    XP_038354999.1
    XP_038355000.1
    XP_038417585.1
    XP_038417586.1
    XP_038417587.1
    XP_038417588.1
    XP_038481626.1
    XP_038481627.1
    XP_038481628.1
    XP_038481629.1
    XP_038547553.1
    XP_038547554.1
    XP_038547555.1
    XP_038547557.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49476595..49483042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691625.1 → XP_038547553.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    2. XM_038691627.1 → XP_038547555.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    3. XM_038691629.1 → XP_038547557.1  ATP-dependent RNA helicase DQX1 isoform X2

      UniProtKB/TrEMBL
      A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 669
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    4. XM_038691626.1 → XP_038547554.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Related
      ENSCAFP00845025860.1, ENSCAFT00845033040.1
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48493745..48500192
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499069.1 → XP_038354997.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    2. XM_038499071.1 → XP_038354999.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    3. XM_038499072.1 → XP_038355000.1  ATP-dependent RNA helicase DQX1 isoform X2

    4. XM_038499070.1 → XP_038354998.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48560489..48566936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625698.1 → XP_038481626.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    2. XM_038625700.1 → XP_038481628.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    3. XM_038625701.1 → XP_038481629.1  ATP-dependent RNA helicase DQX1 isoform X2

    4. XM_038625699.1 → XP_038481627.1  ATP-dependent RNA helicase DQX1 isoform X1

      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49118166..49124613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561657.1 → XP_038417585.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    2. XM_038561659.1 → XP_038417587.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    3. XM_038561660.1 → XP_038417588.1  ATP-dependent RNA helicase DQX1 isoform X2

      UniProtKB/TrEMBL
      A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 669
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    4. XM_038561658.1 → XP_038417586.1  ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8I3PEN7, A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48259133..48265486
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038453107.1 → XP_038309035.1  LOW QUALITY PROTEIN: ATP-dependent RNA helicase DQX1 isoform X1

      UniProtKB/TrEMBL
      A0A8P0SDJ8
      Conserved Domains (1) summary
      COG1643
      Location:18 → 674
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
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