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    HTRA2 HtrA serine peptidase 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 475782, updated on 17-Aug-2024

    Summary

    Official Symbol
    HTRA2provided by VGNC
    Official Full Name
    HtrA serine peptidase 2provided by VGNC
    Primary source
    VGNC:VGNC:41836
    See related
    Ensembl:ENSCAFG00845018463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See HTRA2 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49469859..49472851, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48252304..48255295, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49111429..49114422, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48487009..48490000, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48553751..48556744, complement)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene meiosis 1 associated protein Neighboring gene S-phase kinase-associated protein 1-like Neighboring gene docking protein 1 Neighboring gene lysyl oxidase like 3 Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene DEAQ-box RNA dependent ATPase 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in programmed cell death IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    serine protease HTRA2, mitochondrial
    Names
    protease serine 25
    NP_001271389.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001284460.1NP_001271389.1  serine protease HTRA2, mitochondrial

      See identical proteins and their annotated locations for NP_001271389.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ138643
      UniProtKB/TrEMBL
      A0A8C0KK47, A0A8C0RNJ0, A0A8I3S3D5, A0A8P0PCD1, Q45FF7
      Related
      ENSCAFP00845025545.1, ENSCAFT00845032660.1
      Conserved Domains (1) summary
      TIGR02037
      Location:150453
      degP_htrA_DO; periplasmic serine protease, Do/DeqQ family

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49469859..49472851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48487009..48490000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48553751..48556744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49111429..49114422 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48252304..48255295 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)