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    LBX2 ladybird homeobox 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 483103, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LBX2provided by VGNC
    Official Full Name
    ladybird homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:42604
    See related
    Ensembl:ENSCAFG00845018879
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See LBX2 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49501037..49502888)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48283470..48285322)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49142627..49144479)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48518164..48520013)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48584911..48586763)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene T cell leukemia homeobox 2 Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene coiled-coil domain containing 142 Neighboring gene mitochondrial ribosomal protein L53

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor LBX2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49501037..49502888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691651.1 → XP_038547579.1  transcription factor LBX2

      UniProtKB/TrEMBL
      A0A8C0KPL6, A0A8C0S084, A0A8I3NXJ5
      Related
      ENSCAFP00845026087.1, ENSCAFT00845033326.1
      Conserved Domains (1) summary
      pfam00046
      Location:90 → 142
      Homeobox; Homeobox domain

    RNA

    1. XR_005440299.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48518164..48520013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499094.1 → XP_038355022.1  transcription factor LBX2

      Conserved Domains (1) summary
      pfam00046
      Location:90 → 142
      Homeobox; Homeobox domain

    RNA

    1. XR_005338753.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48584911..48586763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625722.1 → XP_038481650.1  transcription factor LBX2

    RNA

    1. XR_005406640.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49142627..49144479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561682.1 → XP_038417610.1  transcription factor LBX2

      UniProtKB/TrEMBL
      A0A8C0KPL6, A0A8C0S084, A0A8I3NXJ5
      Conserved Domains (1) summary
      pfam00046
      Location:90 → 142
      Homeobox; Homeobox domain

    RNA

    1. XR_005372543.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48283470..48285322
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005630523.4 → XP_005630580.1  transcription factor LBX2

      UniProtKB/TrEMBL
      A0A8C0KPL6, A0A8C0S084, A0A8I3NXJ5
      Conserved Domains (1) summary
      pfam00046
      Location:90 → 142
      Homeobox; Homeobox domain

    RNA

    1. XR_005311075.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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