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    WBP1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856716, updated on 22-Aug-2024

    Summary

    Official Symbol
    WBP1
    Primary source
    FungiDB:YEL002C
    Locus tag
    YEL002C
    See related
    SGD:S000000728; AllianceGenome:SGD:S000000728; VEuPathDB:YEL002C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables glycosyltransferase activity. Contributes to oligosaccharyl transferase activity. Involved in protein N-linked glycosylation. Located in endoplasmic reticulum membrane and nuclear envelope. Part of oligosaccharyltransferase complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ir. Orthologous to human DDOST (dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (148722..150014, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene Yea4p Neighboring gene tubulin-binding prefolding complex subunit GIM4 Neighboring gene Irc22p Neighboring gene alpha-1,3-mannosyltransferase MNN1

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables glycosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    contributes_to oligosaccharyl transferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    involved_in protein N-linked glycosylation via asparagine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein N-linked glycosylation via asparagine IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of oligosaccharyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of oligosaccharyltransferase complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of oligosaccharyltransferase complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 

    General protein information

    Preferred Names
    dolichyl-diphosphooligosaccharide-protein glycotransferase
    NP_010914.3
    • Non-catalytic beta subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes N-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Ost2p involved in binding terminal glucose units of the donor glycan; human homolog DDOST can complement yeast growth defect during down-regulation of the yeast gene

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      148722..150014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178817.3NP_010914.3  TPA: dolichyl-diphosphooligosaccharide-protein glycotransferase [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010914.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DLP5, P33767
      UniProtKB/TrEMBL
      A6ZQU5, B3LS10, B5VHD0, C8Z6Z7, N1PA79
      Conserved Domains (1) summary
      pfam03345
      Location:26422
      DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta