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    BUD22 Bud22p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855028, updated on 2-Nov-2024

    Summary

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    Official Symbol
    BUD22
    Official Full Name
    Bud22p
    Primary source
    SGD:S000004616
    Locus tag
    YMR014W
    See related
    AllianceGenome:SGD:S000004616; FungiDB:YMR014W; VEuPathDB:YMR014W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in maturation of SSU-rRNA. Located in nucleus. Part of 90S preribosome. Orthologous to human SRFBP1 (serum response factor binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See BUD22 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (298868..300427)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C-22 sterol desaturase Neighboring gene Sok2p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Control of yeast retrotransposons mediated through nucleoporin evolution. Rowley PA, et al. PLoS Genet, 2018 Apr. PMID 29694349, Free PMC Article
    2. BUD22 affects Ty1 retrotransposition and ribosome biogenesis in Saccharomyces cerevisiae. Dakshinamurthy A, et al. Genetics, 2010 Aug. PMID 20498295, Free PMC Article
    3. Ribosomal protein and biogenesis factors affect multiple steps during movement of the Saccharomyces cerevisiae Ty1 retrotransposon. Suresh S, et al. Mob DNA, 2015. PMID 26664557, Free PMC Article
    4. Perturbations of Transcription and Gene Expression-Associated Processes Alter Distribution of Cell Size Values in Saccharomyces cerevisiae. Maitra N, et al. G3 (Bethesda), 2019 Jan 9. PMID 30463882, Free PMC Article
    5. A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Ni L, et al. Mol Biol Cell, 2001 Jul. PMID 11452010, Free PMC Article

    See all (39) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in maturation of SSU-rRNA IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in ribosomal small subunit biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of 90S preribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleolus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Bud22p
    NP_013727.1
    • Protein required for rRNA maturation and ribosomal subunit biogenesis; required for 18S rRNA maturation; also required for small ribosomal subunit biogenesis; cosediments with pre-ribosomal particles; mutation decreases efficiency of +1 Ty1 frameshifting and transposition, and affects budding pattern

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      298868..300427
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182510.1 → NP_013727.1  TPA: Bud22p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013727.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZI8, Q04347, Q6B299
      UniProtKB/TrEMBL
      A6ZM76, B3LLR6, G2WK65, N1NY65
      Conserved Domains (1) summary
      pfam09073
      Location:84 → 519
      BUD22
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q04347.1

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