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    HTC1 Htc1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856038, updated on 2-Nov-2024

    Summary

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    Official Symbol
    HTC1
    Official Full Name
    Htc1p
    Primary source
    SGD:S000005988
    Locus tag
    YPL067C
    See related
    AllianceGenome:SGD:S000005988; FungiDB:YPL067C; VEuPathDB:YPL067C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be involved in N-acetylglucosamine metabolic process. Located in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See HTC1 in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (425251..425847, complement)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene farnesyltranstransferase Neighboring gene uncharacterized protein Neighboring gene Rgl1p Neighboring gene ESCRT-I subunit protein VPS28

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001148.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulation of septin dynamics by the Saccharomyces cerevisiae lysine acetyltransferase NuA4. Mitchell L, et al. PLoS One, 2011. PMID 21984913, Free PMC Article
    2. The sensitivity of the yeast, Saccharomyces cerevisiae, to acetic acid is influenced by DOM34 and RPL36A. Samanfar B, et al. PeerJ, 2017. PMID 29158977, Free PMC Article
    3. Yeast genes that enhance the toxicity of a mutant huntingtin fragment or alpha-synuclein. Willingham S, et al. Science, 2003 Dec 5. PMID 14657499
    4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    5. The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. Bussey H, et al. Nature, 1997 May 29. PMID 9169875

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in N-acetylglucosamine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Htc1p
    NP_015258.1
    • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YPL067C is not an essential gene

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      425251..425847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183881.1 → NP_015258.1  TPA: Htc1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015258.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W3U8, Q02754, Q6Q586
      UniProtKB/TrEMBL
      A6ZWI2, B3LL02, C7GTZ0, C8ZIW3, G2WPB3, N1P1P6
      Conserved Domains (1) summary
      pfam12239
      Location:18 → 171
      DUF3605; Protein of unknown function (DUF3605)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q02754.1

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