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    Gm35216 predicted gene, 35216 [ Mus musculus (house mouse) ]

    Gene ID: 102638722, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm35216provided by MGI
    Official Full Name
    predicted gene, 35216provided by MGI
    Primary source
    MGI:MGI:5594375
    See related
    Ensembl:ENSMUSG00000107598 AllianceGenome:MGI:5594375
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 14.9) See more
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    Genomic context

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    See Gm35216 in Genome Data Viewer
    Location:
    6 B2.1; 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (44057422..44060289, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (44080488..44083355, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_15742 Neighboring gene STARR-seq mESC enhancer starr_15743 Neighboring gene STARR-seq mESC enhancer starr_15744 Neighboring gene STARR-seq mESC enhancer starr_15745 Neighboring gene predicted gene, 22939 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_15746 Neighboring gene STARR-seq mESC enhancer starr_15749 Neighboring gene STARR-seq mESC enhancer starr_15750 Neighboring gene STARR-seq mESC enhancer starr_15751 Neighboring gene contactin associated protein-like 2 Neighboring gene STARR-seq mESC enhancer starr_15752 Neighboring gene STARR-seq mESC enhancer starr_15753 Neighboring gene STARR-seq mESC enhancer starr_15754 Neighboring gene STARR-seq mESC enhancer starr_15755 Neighboring gene STARR-seq mESC enhancer starr_15756 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_15757 Neighboring gene STARR-seq mESC enhancer starr_15758 Neighboring gene STARR-seq mESC enhancer starr_15759 Neighboring gene STARR-seq mESC enhancer starr_15760 Neighboring gene predicted gene, 25161

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_167996.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152958
      Related
      ENSMUST00000373174.1

    2. NR_167997.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152958, BB610326
      Related
      ENSMUST00000203777.3

    3. NR_167998.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152958
      Related
      ENSMUST00000373180.1

    4. NR_167999.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152958
      Related
      ENSMUST00000373171.1

    5. NR_168000.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152958
      Related
      ENSMUST00000373162.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      44057422..44060289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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