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    FLJ33534 Putative uncharacterized protein FLJ33534 [ Homo sapiens (human) ]

    Gene ID: 285150, updated on 17-Jun-2024

    Summary

    Gene symbol
    FLJ33534
    Gene description
    Putative uncharacterized protein FLJ33534
    See related
    Ensembl:ENSG00000145063
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See FLJ33534 in Genome Data Viewer
    Location:
    2p25.1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (11099851..11132176, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (11131309..11164568, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (11239977..11272302, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1954 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:11041995-11042565 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11049105-11049605 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11058947-11059850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11059851-11060754 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:11075650-11076849 Neighboring gene potassium voltage-gated channel modifier subfamily F member 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11105924-11106900 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11108135-11108636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11108637-11109136 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15315 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15316 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15317 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11245073-11245572 Neighboring gene ribosomal protein L6 pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11269908-11270408 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11270409-11270909 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11292424-11292924 Neighboring gene chromosome 2 open reading frame 50 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11170 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11171 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:11298670-11298918 Neighboring gene solute carrier family 66 member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
    EBI GWAS Catalog
    Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040080.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC062028, BC111723
      Related
      ENST00000536743.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      11099851..11132176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      11131309..11164568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_182586.1: Suppressed sequence

      Description
      NM_182586.1: This RefSeq was permanently suppressed because there is no support for the protein and it is a nonsense-mediated mRNA decay (NMD) candidate.