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    RPS29A ribosomal 40S subunit protein S29A [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851104, updated on 29-Jun-2024

    Summary

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    Gene symbol
    RPS29A
    Gene description
    ribosomal 40S subunit protein S29A
    Primary source
    FungiDB:YLR388W
    Locus tag
    YLR388W
    See related
    SGD:S000004380; AllianceGenome:SGD:S000004380; VEuPathDB:YLR388W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 13. Orthologous to human RPS29 (ribosomal protein S29). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RPS29A in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (898651..898821)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Vac14p Neighboring gene Reh1p Neighboring gene ncRNA Neighboring gene metalloendopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Quantitative proteomics identifies redox switches for global translation modulation by mitochondrially produced reactive oxygen species. Topf U, et al. Nat Commun, 2018 Jan 22. PMID 29358734, Free PMC Article
    2. Introns within ribosomal protein genes regulate the production and function of yeast ribosomes. Parenteau J, et al. Cell, 2011 Oct 14. PMID 22000012
    3. Analysis of the in vivo assembly pathway of eukaryotic 40S ribosomal proteins. Ferreira-Cerca S, et al. Mol Cell, 2007 Nov 9. PMID 17996708
    4. Nuclear pore targeting of the yeast Pom33 nucleoporin depends on karyopherin and lipid binding. Floch AG, et al. J Cell Sci, 2015 Jan 15. PMID 25413348
    5. Isolation of seventeen proteins and amino-terminal amino acid sequences of eight proteins from cytoplasmic ribosomes of yeast. Otaka E, et al. Biochemistry, 1982 Sep 14. PMID 6814480

    See all (66) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 40S subunit protein S29A
    NP_013492.3
    • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29A has a paralog, RPS29B, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      898651..898821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182277.3 → NP_013492.3  TPA: ribosomal 40S subunit protein S29A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013492.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A2TBM8, D6VZ23, P05761, P41057
      UniProtKB/TrEMBL
      A0A6A5PV92, A7A1R3, B3RHQ3, C7GXJ2, C8ZDZ7, G2WJK3, N1P1T3
      Conserved Domains (1) summary
      PTZ00218
      Location:5 → 56
      PTZ00218; 40S ribosomal protein S29; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P41057.3

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