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    ntp1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541115, updated on 22-Aug-2024

    Summary

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    Official Symbol
    ntp1
    Primary source
    PomBase:SPBC660.07
    Locus tag
    SPOM_SPBC660.07
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (206581..209641)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein wwm2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Atg38 Neighboring gene protein mug168

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A role for calcium in the regulation of neutral trehalase activity in the fission yeast Schizosaccharomyces pombe. Franco A, et al. Biochem J, 2003 Nov 15. PMID 12943532, Free PMC Article
    2. Role for trehalase during germination of spores in the fission yeast Schizosaccharomyces pombe. Beltran FF, et al. FEMS Microbiol Lett, 2000 Dec 1. PMID 11094289
    3. Enhancement of neutral trehalase activity by oxidative stress in the fission yeast Schizosaccharomyces pombe. Fernández J, et al. Fungal Genet Biol, 1998 Nov. PMID 9974219
    4. Characterization of mutants devoid of neutral trehalase activity in the fission yeast Schizosaccharomyces pombe: partial protection from heat shock and high-salt stress. Cansado J, et al. J Bacteriol, 1998 Mar. PMID 9495778, Free PMC Article
    5. Lipids and Trehalose Actively Cooperate in Heat Stress Management of Schizosaccharomyces pombe. Péter M, et al. Int J Mol Sci, 2021 Dec 9. PMID 34948069, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Lipids and Trehalose Actively Cooperate in Heat Stress Management of Schizosaccharomyces pombe.
      Title: Lipids and Trehalose Actively Cooperate in Heat Stress Management of Schizosaccharomyces pombe.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables alpha,alpha-trehalase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables alpha,alpha-trehalase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables alpha,alpha-trehalase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables calcium ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ascospore formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in trehalose catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in trehalose catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in trehalose metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in trehalose metabolism in response to stress TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    alpha,alpha-trehalase Ntp1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      206581..209641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020993.3 → NP_595086.1  alpha,alpha-trehalase Ntp1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595086.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O42893, P78922, Q9UU37
      Conserved Domains (3) summary
      COG1626
      Location:84 → 704
      TreA; Neutral trehalase [Carbohydrate transport and metabolism]
      pfam01204
      Location:146 → 698
      Trehalase; Trehalase
      pfam07492
      Location:89 → 118
      Trehalase_Ca-bi; Neutral trehalase Ca2+ binding domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials