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    vps26 retromer complex arrestin related endocytic adaptor ubunit Vps26 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543395, updated on 18-Sep-2024

    Summary

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    Official Symbol
    vps26
    Official Full Name
    retromer complex arrestin related endocytic adaptor ubunit Vps26
    Primary source
    PomBase:SPAC4G9.13c
    Locus tag
    SPOM_SPAC4G9.13C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    pep8
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    Genomic context

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    See vps26 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (2276891..2279410, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ornithine carbamoyltransferase Arg3 Neighboring gene cytosine-mismatch-binding protein 1 Neighboring gene gluconokinase Neighboring gene ncRNA Neighboring gene PMP22 family protein 2 Neighboring gene ncRNA Neighboring gene ketoreductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Vacuolar protein sorting receptor in Schizosaccharomyces pombe. Iwaki T, et al. Microbiology (Reading), 2006 May. PMID 16622069
    2. Promoter nucleosome dynamics regulated by signalling through the CTD code. Materne P, et al. Elife, 2015 Jun 22. PMID 26098123, Free PMC Article
    3. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
    4. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular protein transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in retrograde transport, endosome to Golgi IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endosome IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    part_of retromer complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of retromer complex IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retromer complex arrestin related endocytic adaptor ubunit Vps26

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2276891..2279410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019127.3 → NP_593695.1  retromer complex arrestin related endocytic adaptor ubunit Vps26 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593695.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10243
      Conserved Domains (1) summary
      pfam03643
      Location:5 → 279
      Vps26; Vacuolar protein sorting-associated protein 26
    Nucleotide Protein
    Heading Accession and Version

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