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    dal2 allantoicase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541441, updated on 22-Jun-2024

    Summary

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    Gene symbol
    dal2
    Gene description
    allantoicase
    Locus tag
    SPOM_SPAC1F7.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    ala1
    Old locus tag
    SPAC1F7.09c
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    Genomic context

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    See dal2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4241812..4243393, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ncRNA Neighboring gene hydantoin racemase family protein Neighboring gene transcription factor Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic studies of purine breakdown in the fission yeast Schizosaccharomyces pombe. Kinghorn JR, et al. Curr Genet, 1984 Feb. PMID 24177583
    2. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables allantoicase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables allantoicase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in allantoin catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in urea cycle IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    allantoicase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4241812..4243393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019924.3 → NP_594495.1  allantoicase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594495.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09913
      Conserved Domains (2) summary
      COG4266
      Location:1 → 338
      Alc; Allantoicase [Nucleotide transport and metabolism]
      pfam03561
      Location:31 → 178
      Allantoicase; Allantoicase repeat
    Nucleotide Protein
    Heading Accession and Version

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