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    zas1 transcription regulator Zas1;zinc finger domain-containing transcription factor Zas1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539907, updated on 22-Jun-2024

    Summary

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    Gene symbol
    zas1
    Gene description
    transcription regulator Zas1;zinc finger domain-containing transcription factor Zas1
    Locus tag
    SPOM_SPBC1198.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Old locus tag
    SPBC1198.04c
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    Genomic context

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    See zas1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    10
    Sequence:
    Chromosome: II; NC_003423.3 (177469..180628, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene adenine deaminase Dea2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Gly Neighboring gene ncRNA Neighboring gene guanylate kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Control of mitotic chromosome condensation by the fission yeast transcription factor Zas1. Schiklenk C, et al. J Cell Biol, 2018 Jul 2. PMID 29735745, Free PMC Article
    2. Klf1, a C2H2 zinc finger-transcription factor, is required for cell wall maintenance during long-term quiescence in differentiated G0 phase. Shimanuki M, et al. PLoS One, 2013. PMID 24167631, Free PMC Article
    3. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
    4. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    5. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription regulator Zas1;zinc finger domain-containing transcription factor Zas1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      177469..180628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001431008.1 → NP_001417955.1  transcription regulator Zas1 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

    2. NM_001020979.3 → NP_595073.1  zinc finger domain-containing transcription factor Zas1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595073.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UTS4, Q9UTS5, Q9UU54
      Conserved Domains (5) summary
      COG5048
      Location:257 → 818
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:28 → 50
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:26 → 50
      zf-C2H2; Zinc finger, C2H2 type
      pfam04082
      Location:419 → 633
      Fungal_trans; Fungal specific transcription factor domain
      pfam13465
      Location:42 → 67
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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