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    YNL162W-A uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855559, updated on 29-Jun-2024

    Summary

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    Gene symbol
    YNL162W-A
    Gene description
    uncharacterized protein
    Primary source
    FungiDB:YNL162W-A
    Locus tag
    YNL162W-A
    See related
    SGD:S000007624; AllianceGenome:SGD:S000007624; VEuPathDB:YNL162W-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See YNL162W-A in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (330329..330547)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Ibd2p Neighboring gene GTPase RIA1 Neighboring gene ribosomal 60S subunit protein L42A Neighboring gene serine/threonine protein kinase CBK1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic exploration of the hemiascomycetous yeasts: 4. The genome of Saccharomyces cerevisiae revisited. Blandin G, et al. FEBS Lett, 2000 Dec 22. PMID 11152879
    2. The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications. Philippsen P, et al. Nature, 1997 May 29. PMID 9169873
    3. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article
    4. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131, Free PMC Article
    5. Global analysis of protein localization in budding yeast. Huh WK, et al. Nature, 2003 Oct 16. PMID 14562095

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_076906.1
    • hypothetical protein; identified by homology

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      330329..330547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184490.1 → NP_076906.1  TPA: uncharacterized protein YNL162W-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_076906.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W120, Q3E7A8
      UniProtKB/TrEMBL
      A0A8H4F924, A6ZRS1, B3LP18, C7GTD9, C8ZG66, G2WLU4, N1NZA3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E7A8.1

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