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    mra1 ribosome biogenesis protein Mra1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542139, updated on 17-May-2024

    Summary

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    Gene symbol
    mra1
    Gene description
    ribosome biogenesis protein Mra1
    Primary source
    PomBase:SPAC18G6.07c
    Locus tag
    SPAC18G6.07c
    See related
    FungiDB:SPAC18G6.07c; VEuPathDB:SPAC18G6.07c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See mra1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2229963..2231496, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative translation elongation regulator Gcn1 Neighboring gene miscRNA Neighboring gene putative U3 snoRNP-associated protein Utp11 Neighboring gene uncharacterized protein Neighboring gene LEM domain protein Heh1/Lem2 Neighboring gene ribosomal DNA (rDNA) transcription factor Rrn3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Schizosaccharomyces pombe mra1 gene, which is required for cell growth and mating, can suppress the mating inefficiency caused by a deficit in the Ras1 activity. Hakuno F, et al. Genes Cells, 1996 Mar. PMID 9133664
    2. Mkt1 is required for RNAi-mediated silencing and establishment of heterochromatin in fission yeast. Taglini F, et al. Nucleic Acids Res, 2020 Feb 20. PMID 31822915, Free PMC Article
    3. Mitotic substrates of the kinase aurora with roles in chromatin regulation identified through quantitative phosphoproteomics of fission yeast. Koch A, et al. Sci Signal, 2011 Jun 28. PMID 21712547
    4. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
    5. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables rRNA (pseudouridine) methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in rRNA base methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 
    part_of small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ribosome biogenesis protein Mra1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2229963..2231496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019103.2 → NP_593671.1  ribosome biogenesis protein Mra1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593671.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10107
      Conserved Domains (1) summary
      pfam03587
      Location:152 → 352
      EMG1; EMG1/NEP1 methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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