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    ICY1 Icy1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855235, updated on 17-May-2024

    Summary

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    Gene symbol
    ICY1
    Gene description
    Icy1p
    Primary source
    FungiDB:YMR195W
    Locus tag
    YMR195W
    See related
    SGD:S000004808; AllianceGenome:SGD:S000004808; VEuPathDB:YMR195W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in fungal-type vacuole membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ICY1 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (654034..654417)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Cmc4p Neighboring gene uncharacterized protein Neighboring gene v-SNARE protein VTI1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screening and characterization of transposon-insertion mutants in a pseudohyphal strain of Saccharomyces cerevisiae. Suzuki C, et al. Yeast, 2003 Apr 15. PMID 12673624
    2. Transcriptional profiling of Saccharomyces cerevisiae cells under adhesion-inducing conditions. Kleinschmidt M, et al. Mol Genet Genomics, 2005 Jun. PMID 15843968
    3. Extensive transcriptional heterogeneity revealed by isoform profiling. Pelechano V, et al. Nature, 2013 May 2. PMID 23615609, Free PMC Article
    4. Atg41/Icy2 regulates autophagosome formation. Yao Z, et al. Autophagy, 2015. PMID 26565778, Free PMC Article
    5. Suppression of a defect in mitochondrial protein import identifies cytosolic proteins required for viability of yeast cells lacking mitochondrial DNA. Dunn CD, et al. Genetics, 2003 Sep. PMID 14504216, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in fungal-type vacuole membrane HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuolar membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Icy1p
    NP_013922.1
    • hypothetical protein; required for viability in rich media of cells lacking mitochondrial DNA; mutants have an invasive growth defect with elongated morphology; induced by amino acid starvation; ICY1 has a paralog, ATG41, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      654034..654417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182702.1 → NP_013922.1  TPA: Icy1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013922.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W020, Q04329
      UniProtKB/TrEMBL
      A0A8H4BXK4, A6ZMQ7, B3LM83, C7GRF6, N1NYY5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q04329.1

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