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    pyridoxine-pyridoxal-pyridoxamine kinase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538966, updated on 18-Sep-2024

    Summary

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    Official Full Name
    pyridoxine-pyridoxal-pyridoxamine kinase
    Primary source
    PomBase:SPCC18.10
    Locus tag
    SPOM_SPCC18.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003421.2 (1974678..1976525)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA-directed RNA polymerase III complex subunit Rpc53 Neighboring gene aprataxin-like protein Neighboring gene lysine--tRNA (Lys) ligase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Set1C complex and Lid2 complex subunit, Dpy-30 domain Sdc1 Neighboring gene rRNA processing protein Utp23 Neighboring gene tRNA (guanine-N7-)-methyltransferase subunit Trm82

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
    2. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyridoxal kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in pyridoxal 5'-phosphate salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    pyridoxine-pyridoxal-pyridoxamine kinase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1974678..1976525
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023380.3 → NP_588389.1  pyridoxine-pyridoxal-pyridoxamine kinase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588389.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74860
      Conserved Domains (1) summary
      COG2240
      Location:12 → 332
      PdxK; Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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