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    CG13795 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34049, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13795provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031937
    Locus tag
    Dmel_CG13795
    See related
    AllianceGenome:FB:FBgn0031937
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT33284; Dmel\CG13795
    Summary
    Predicted to enable gamma-aminobutyric acid:sodium symporter activity and neurotransmitter:sodium symporter activity. Predicted to be involved in neurotransmitter transport and sodium ion transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in several structures, including anterior-posterior subdivision of organism; extraembryonic structure; and yolk nucleus. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG13795 in Genome Data Viewer
    Location:
    28C2-28C2; 2-28 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7723045..7726298, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7723045..7726298, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46074 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive classification of the auditory sensory projections in the brain of the fruit fly Drosophila melanogaster. Kamikouchi A, et al. J Comp Neurol, 2006 Nov 20. PMID 16998934
    2. The invertebrate B(0) system transporter, D. melanogaster NAT1, has unique d-amino acid affinity and mediates gut and brain functions. Miller MM, et al. Insect Biochem Mol Biol, 2008 Oct. PMID 18718864, Free PMC Article
    3. Comparative sequence analysis and tissue localization of members of the SLC6 family of transporters in adult Drosophila melanogaster. Thimgan MS, et al. J Exp Biol, 2006 Sep. PMID 16916974
    4. Drosophila melanogaster as a genetic model system to study neurotransmitter transporters. Martin CA, et al. Neurochem Int, 2014 Jul. PMID 24704795, Free PMC Article
    5. Post-transcriptional repression of the Drosophila midkine and pleiotrophin homolog miple by HOW is essential for correct mesoderm spreading. Toledano-Katchalski H, et al. Development, 2007 Oct. PMID 17728343

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables glycine:sodium symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables neurotransmitter transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables neurotransmitter:sodium symporter activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycine import across plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in neurotransmitter transport ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    involved_in neurotransmitter transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13795-PB
    CG13795-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      7723045..7726298 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298783.1 → NP_001285712.1  uncharacterized protein Dmel_CG13795, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285712.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU26, Q9VLY3
      Conserved Domains (1) summary
      cd06857
      Location:27 → 505
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. NM_135294.2 → NP_609138.3  uncharacterized protein Dmel_CG13795, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609138.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU26, Q9VLY3
      Conserved Domains (1) summary
      cd06857
      Location:27 → 505
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7YU26 Q7YU26
    Q9VLY3 Q9VLY3

    Gene LinkOut

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