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    LOC401324 uncharacterized LOC401324 [ Homo sapiens (human) ]

    Gene ID: 401324, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC401324
    Gene description
    uncharacterized LOC401324
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC401324 in Genome Data Viewer
    Location:
    7p14.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (35313855..35376476)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (35454927..35517511)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (35353466..35416086)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene DPY19L2 pseudogene 1 Neighboring gene S100A11 pseudogene 2 Neighboring gene VISTA enhancer hs466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35288961-35289528 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35289529-35290094 Neighboring gene T-box transcription factor 20 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:35292632-35293208 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr7:35296083-35296894 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35296895-35297706 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35297707-35298518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35298519-35299329 Neighboring gene VISTA enhancer hs1659 Neighboring gene VISTA enhancer hs2286 Neighboring gene uncharacterized LOC105375230 Neighboring gene VISTA enhancer hs461 Neighboring gene VISTA enhancer hs472 Neighboring gene VISTA enhancer hs463 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18095 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35614811-35615311 Neighboring gene uncharacterized LOC124901614

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Whole genome association scan for genetic polymorphisms influencing information processing speed.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038864.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC007652, AC009531

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      35313855..35376476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      35454927..35517511
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)