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    LINC00943 long intergenic non-protein coding RNA 943 [ Homo sapiens (human) ]

    Gene ID: 100507206, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00943provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 943provided by HGNC
    Primary source
    HGNC:HGNC:48639
    See related
    Ensembl:ENSG00000189238 AllianceGenome:HGNC:48639
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 6.1) See more
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    Genomic context

    See LINC00943 in Genome Data Viewer
    Location:
    12q24.32
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (126737007..126746256)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (126744595..126753846)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (127221553..127230802)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100996671 Neighboring gene long intergenic non-protein coding RNA 2824 Neighboring gene long intergenic non-protein coding RNA 944 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:127226104-127227303 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:127256382-127257581 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:127277009-127277172 Neighboring gene transmembrane protein 132B pseudogene Neighboring gene long intergenic non-protein coding RNA 2372

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038256.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA400092, AC069235, AL567219, BC039096, DB450910
      Related
      ENST00000659340.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      126737007..126746256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      126744595..126753846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)