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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_007495.2 RefSeqGene
- Range
-
5432..34181
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_795
mRNA and Protein(s)
-
NM_001318038.3 → NP_001304967.1 lactosylceramide 4-alpha-galactosyltransferase
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AB037883, AK312927, BC017068, DA328721
- Consensus CDS
-
CCDS14041.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
NM_017436.7 → NP_059132.1 lactosylceramide 4-alpha-galactosyltransferase
See identical proteins and their annotated locations for NP_059132.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the supported protein. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AB037883, BC017068, HY140390
- Consensus CDS
-
CCDS14041.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Related
- ENSP00000494127.1, ENST00000642412.2
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
RNA
-
NR_146459.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate 3' exon structure, compared to variant 1. This variant is represented as non-coding because it lacks the entire coding region found in variant 1. This variant is described in PMID:20971946.
- Source sequence(s)
-
AL049757, GU902278, HY140390
- Related
-
ENST00000647439.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
42692121..42721301 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005261648.5 → XP_005261705.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_005261705.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_047441412.1 → XP_047297368.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
-
A0A0S2Z5J1
-
XM_005261647.4 → XP_005261704.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_005261704.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Related
- ENSP00000370678.3, ENST00000381278.4
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_005261644.3 → XP_005261701.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_005261701.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_017028831.2 → XP_016884320.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_005261646.5 → XP_005261703.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_005261703.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_011530233.3 → XP_011528535.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_011528535.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Related
- ENSP00000384794.1, ENST00000401850.5
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_006724266.4 → XP_006724329.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_006724329.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
-
XM_006724265.4 → XP_006724328.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
See identical proteins and their annotated locations for XP_006724328.1
- UniProtKB/Swiss-Prot
- B2R7C4, Q9NPC4, Q9P1X5
- UniProtKB/TrEMBL
- A0A0S2Z5J1, A9XEA7, B0L3P6, I6S6F0, Q540I5, Q540I6, Q6RJV9, Q6RJW0, Q6RJW1, Q7Z2I1
- Conserved Domains (2) summary
-
- pfam04572
Location:227 → 349
- Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
- cl19952
Location:94 → 214
- Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
43172985..43202215 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054325716.1 → XP_054181691.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325710.1 → XP_054181685.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325717.1 → XP_054181692.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325714.1 → XP_054181689.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325712.1 → XP_054181687.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325711.1 → XP_054181686.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325713.1 → XP_054181688.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325709.1 → XP_054181684.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325715.1 → XP_054181690.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079
-
XM_054325708.1 → XP_054181683.1 lactosylceramide 4-alpha-galactosyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q5D079