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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029062.2 RefSeqGene
- Range
-
4986..86903
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_182663.4 → NP_872604.1 ras association domain-containing protein 5 isoform A
See identical proteins and their annotated locations for NP_872604.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), also known as transcript A, represents the longest transcript and encodes the longest isoform (A), also known as NORE1A.
- Source sequence(s)
-
AC244034, AK289861, AK291268, BC004270, CD367770
- Consensus CDS
-
CCDS30998.1
- UniProtKB/Swiss-Prot
- A8K1E6, Q5SY32, Q8WWV9, Q8WWW0, Q8WXF4, Q9BT99
- UniProtKB/TrEMBL
-
A8K5F3
- Related
- ENSP00000462099.1, ENST00000579436.7
- Conserved Domains (3) summary
-
- cd17220
Location:207 → 362
- RA_RASSF5; Ras-associating (RA) domain of Ras-association domain family 5 (RASSF5)
- pfam16517
Location:372 → 410
- Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
- cd20886
Location:120 → 171
- C1_RASSF5; protein kinase C conserved region 1 (C1 domain) found in Ras association domain-containing protein 5 (RASSF5) and similar proteins
-
NM_182664.4 → NP_872605.1 ras association domain-containing protein 5 isoform B
See identical proteins and their annotated locations for NP_872605.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, compared to variant 1, that causes a frameshift. The resulting protein (isoform B) is shorter and has a distinct C-terminus, compared to isoform A.
- Source sequence(s)
-
AC244034, AK289861, AK291268, AY062003, BC004270, CD367770
- Consensus CDS
-
CCDS1463.1
- UniProtKB/TrEMBL
-
A0A075B763
- Related
- ENSP00000462544.1, ENST00000580449.5
- Conserved Domains (2) summary
-
- cd00029
Location:133 → 170
- C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
- cl00155
Location:272 → 330
- UBQ; Ubiquitin-like proteins
-
NM_182665.4 → NP_872606.1 ras association domain-containing protein 5 isoform C
See identical proteins and their annotated locations for NP_872606.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as transcript B, differs in the 5' UTR, lacks a portion of the 5' coding region, and intiates translation at an alternate start codon, compared to variant 1. The resulting isoform (C), also known as NORE1B, is shorter and has a distinct N-terminus when compared to isoform A.
- Source sequence(s)
-
AC244034, BC004270, BC042651, CD367770, DA370470
- Consensus CDS
-
CCDS1464.1
- UniProtKB/TrEMBL
-
A8K7M4
- Related
- ENSP00000462576.1, ENST00000577571.5
- Conserved Domains (2) summary
-
- cd17220
Location:54 → 209
- RA_RASSF5; Ras-associating (RA) domain of Ras-association domain family 5 (RASSF5)
- pfam16517
Location:218 → 257
- Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
206507531..206589448
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
205771712..205853623
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_031437.1: Suppressed sequence
- Description
- NM_031437.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.