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    LOC101929116 uncharacterized LOC101929116 [ Homo sapiens (human) ]

    Gene ID: 101929116, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC101929116
    Gene description
    uncharacterized LOC101929116
    See related
    Ensembl:ENSG00000288537
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC101929116 in Genome Data Viewer
    Location:
    9q33.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (126270124..126275915, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (138475925..138481715, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (129032403..129038194, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376274 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:128908419-128909393 Neighboring gene VISTA enhancer hs1015 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:128924749-128925250 Neighboring gene uncharacterized LOC105376275 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20285 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20286 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129089674-129090325 Neighboring gene Sharpr-MPRA regulatory region 7128 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129098349-129098848 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129097847-129098348 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129109020-129109980 Neighboring gene multivesicular body subunit 12B Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129138261-129138866 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129138867-129139471 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129141601-129142508 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20287 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129177967-129178559 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129183037-129183720 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:129183721-129184405 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:129185921-129186420 Neighboring gene uncharacterized LOC124902337 Neighboring gene non-coding repressor of NFAT

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_121584.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL162391, AL445664
      Related
      ENST00000419853.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      126270124..126275915 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      138475925..138481715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)