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    PF3D7_1030100 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810451, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_1030100
    Gene description
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
    Primary source
    PlasmoDB:PF3D7_1030100
    Locus tag
    PF3D7_1030100
    See related
    VEuPathDB:PF3D7_1030100
    Gene type
    protein coding
    RNA name
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_1030100 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Sequence:
    Chromosome: 10; NC_037281.1 (1224519..1229092, complement)

    Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene transcription elongation factor SPT4, putative Neighboring gene claudin-like apicomplexan microneme protein, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037281.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
    XP_001347578.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037281.1 Reference assembly

      Range
      1224519..1229092 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347542.1 → XP_001347578.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347578.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024X7D4, A0A2I0BRF5, Q8IJA4, W7FHR6
      Conserved Domains (3) summary
      COG1643
      Location:587 → 1290
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      cd05684
      Location:329 → 408
      S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
      cl41749
      Location:4 → 54
      GH2_like; GIPC homology 2 (GH2) domain-like family
    Nucleotide Protein
    Heading Accession and Version

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