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    PF3D7_1206200 eukaryotic translation initiation factor 3 subunit C, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811115, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1206200
    Gene description
    eukaryotic translation initiation factor 3 subunit C, putative
    Locus tag
    PF3D7_1206200
    See related
    PlasmoDB:PF3D7_1206200; VEuPathDB:PF3D7_1206200
    Gene type
    protein coding
    RNA name
    eukaryotic translation initiation factor 3 subunit C, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1206200 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Sequence:
    Chromosome: 12; NC_037284.1 (275744..279336, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene shewanella-like protein phosphatase 2 Neighboring gene IMP-specific 5'-nucleotidase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene rhodanese like protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    enables translation initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of eukaryotic translation initiation factor 3 complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit C, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      275744..279336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350435.1 → XP_001350471.1  eukaryotic translation initiation factor 3 subunit C, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350471.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V5B1, A0A024X5R6, A0A0L1ICZ7, A0A0L7KH86, Q8I5Y3, W7FJH3, W7FMK0, W7J981, W7JRY6
      Conserved Domains (2) summary
      smart00088
      Location:828 → 905
      PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
      pfam05470
      Location:328 → 757
      eIF-3c_N; Eukaryotic translation initiation factor 3 subunit 8 N-terminus
    Nucleotide Protein
    Heading Accession and Version

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