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    PF3D7_1232100 60 kDa chaperonin [ Plasmodium falciparum 3D7 ]

    Gene ID: 811361, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1232100
    Gene description
    60 kDa chaperonin
    Locus tag
    PF3D7_1232100
    See related
    PlasmoDB:PF3D7_1232100; VEuPathDB:PF3D7_1232100
    Gene type
    protein coding
    RNA name
    60 kDa chaperonin
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1232100 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Sequence:
    Chromosome: 12; NC_037284.1 (1328311..1331371, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein, putative Neighboring gene phenylalanine--tRNA ligase Neighboring gene dihydrolipoyl dehydrogenase, mitochondrial Neighboring gene cytochrome b5, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The use of DsRED in single- and dual-color fluorescence labeling of mitochondrial and plastid organelles in Plasmodium falciparum. Sato S, et al. Mol Biochem Parasitol, 2004 Mar. PMID 14747157
    2. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
    3. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    4. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    5. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in food vacuole HDA PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    60 kDa chaperonin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1328311..1331371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350679.2 → XP_001350715.2  60 kDa chaperonin [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350715.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V5D2, A0A024W3Q2, A0A024WLX1, A0A024X4L1, A0A0L7K8Q9, Q8I0V3, W4ICR1, W4J322, W7FBI7, W7FVI4, W7J8A3, W7JQR9
      Conserved Domains (1) summary
      PTZ00114
      Location:56 → 645
      PTZ00114; Heat shock protein 60; Provisional
    Nucleotide Protein
    Heading Accession and Version

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