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    PF3D7_1352100 ABC transporter B family member 6, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814236, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1352100
    Gene description
    ABC transporter B family member 6, putative
    Locus tag
    PF3D7_1352100
    See related
    PlasmoDB:PF3D7_1352100; VEuPathDB:PF3D7_1352100
    Gene type
    protein coding
    RNA name
    ABC transporter B family member 6, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1352100 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (2076078..2079227, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene GTP-binding protein, putative Neighboring gene U3 small nucleolar RNA-associated protein 15, putative Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. Krogh A, et al. J Mol Biol, 2001 Jan 19. PMID 11152613

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABC transporter B family member 6, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      2076078..2079227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350197.1 → XP_001350233.1  ABC transporter B family member 6, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350233.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024W1Y3, A0A024X162, Q8IDH9, W4J048, W7JZI1
      Conserved Domains (1) summary
      COG5265
      Location:424 → 1042
      ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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