U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PF3D7_1302700 ATP-dependent RNA helicase DHR1, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813690, updated on 12-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PF3D7_1302700
    Gene description
    ATP-dependent RNA helicase DHR1, putative
    Locus tag
    PF3D7_1302700
    See related
    PlasmoDB:PF3D7_1302700; VEuPathDB:PF3D7_1302700
    Gene type
    protein coding
    RNA name
    ATP-dependent RNA helicase DHR1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PF3D7_1302700 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Sequence:
    Chromosome: 13; NC_004331.3 (145174..150198)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene deoxyhypusine hydroxylase Neighboring gene 40S ribosomal protein S7, putative Neighboring gene conserved protein, unknown function

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA helicase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within ribosome biogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of small-subunit processome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    ATP-dependent RNA helicase DHR1, putative
    XP_001349754.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      145174..150198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349718.1 → XP_001349754.1  ATP-dependent RNA helicase DHR1, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349754.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7M3J7, A0A2I0BW13, Q8IET8
      Conserved Domains (3) summary
      COG1643
      Location:446 → 1144
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      PRK05901
      Location:663 → 851
      PRK05901; RNA polymerase sigma factor; Provisional
      pfam07717
      Location:1324 → 1413
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.