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    PF3D7_1350200 small nuclear ribonucleoprotein E, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813814, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1350200
    Gene description
    small nuclear ribonucleoprotein E, putative
    Locus tag
    PF3D7_1350200
    See related
    PlasmoDB:PF3D7_1350200; VEuPathDB:PF3D7_1350200
    Gene type
    protein coding
    RNA name
    small nuclear ribonucleoprotein E, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1350200 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Sequence:
    Chromosome: 13; NC_004331.3 (2009477..2010281, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene lysine--tRNA ligase Neighboring gene conserved protein, unknown function Neighboring gene ubiquitin-activating enzyme E1, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within spliceosomal snRNP assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    small nuclear ribonucleoprotein E, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      2009477..2010281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350179.1 → XP_001350215.1  small nuclear ribonucleoprotein E, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350215.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1IGU5, A0A0L7KD70, A0A2I0BRN0, Q8IDJ7, W7FRH1
      Conserved Domains (1) summary
      PTZ00138
      Location:1 → 89
      PTZ00138; small nuclear ribonucleoprotein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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