U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PF3D7_0416100 glutamyl-tRNA(Gln) amidotransferase subunit A [ Plasmodium falciparum 3D7 ]

    Gene ID: 812540, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PF3D7_0416100
    Gene description
    glutamyl-tRNA(Gln) amidotransferase subunit A
    Primary source
    PlasmoDB:PF3D7_0416100
    Locus tag
    PF3D7_0416100
    See related
    VEuPathDB:PF3D7_0416100
    Gene type
    protein coding
    RNA name
    glutamyl-tRNA(Gln) amidotransferase subunit A
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PF3D7_0416100 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_004318.2 (706529..709009)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L15, putative Neighboring gene RNA-binding protein, putative Neighboring gene conserved protein, unknown function Neighboring gene DNA helicase MCM9, putative

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Plasmodium Apicoplast Gln-tRNAGln Biosynthesis Utilizes a Unique GatAB Amidotransferase Essential for Erythrocytic Stage Parasites. Mailu BM, et al. J Biol Chem, 2015 Dec 4. PMID 26318454, Free PMC Article
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within glutaminyl-tRNAGln biosynthesis via transamidation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of glutamyl-tRNA(Gln) amidotransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glutamyl-tRNA(Gln) amidotransferase subunit A
    XP_001351469.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      706529..709009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351433.1 → XP_001351469.1  glutamyl-tRNA(Gln) amidotransferase subunit A [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351469.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1I679, A0A2I0BZD1, Q8I1S6
      Conserved Domains (1) summary
      cl18951
      Location:239 → 412
      Amidase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials