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    PF3D7_0517700 eukaryotic translation initiation factor 3 subunit B, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812992, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_0517700
    Gene description
    eukaryotic translation initiation factor 3 subunit B, putative
    Primary source
    PlasmoDB:PF3D7_0517700
    Locus tag
    PF3D7_0517700
    See related
    VEuPathDB:PF3D7_0517700
    Gene type
    protein coding
    RNA name
    eukaryotic translation initiation factor 3 subunit B, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_0517700 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_004326.2 (743179..745329)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene UTP--glucose-1-phosphate uridylyltransferase, putative Neighboring gene F-actin-capping protein subunit beta, putative Neighboring gene apicortin, putative Neighboring gene zinc finger protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit B, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      743179..745329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351698.1 → XP_001351734.1  eukaryotic translation initiation factor 3 subunit B, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351734.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VCA0, A0A024VUR1, A0A024WEY3, A0A024WUB0, A0A024XC19, A0A0L0CZE1, A0A0L1I481, A0A0L7K5Y2, A0A0L7LYK6, Q8I3T1, W4INC9, W4IVV0, W7FNG3, W7FSW5, W7JGH8, W7KAC9
      Conserved Domains (3) summary
      COG5354
      Location:178 → 674
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:213 → 246
      7WD40; WD40 repeat [structural motif]
      cd12278
      Location:48 → 138
      RRM_eIF3B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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