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    PF3D7_0904800 replication protein A1, small fragment [ Plasmodium falciparum 3D7 ]

    Gene ID: 813327, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0904800
    Gene description
    replication protein A1, small fragment
    Locus tag
    PF3D7_0904800
    See related
    PlasmoDB:PF3D7_0904800; VEuPathDB:PF3D7_0904800
    Gene type
    protein coding
    RNA name
    replication protein A1, small fragment
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0904800 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Sequence:
    Chromosome: 9; NC_004330.2 (222271..224156)

    Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene ubiquitin specific protease, putative Neighboring gene bacterial histone-like protein Neighboring gene copper-transporting ATPase Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004330.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Opposing roles for two molecular forms of replication protein A in Rad51-Rad54-mediated DNA recombination in Plasmodium falciparum. Gopalakrishnan AM, et al. mBio, 2013 Apr 30. PMID 23631919, Free PMC Article
    2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    replication protein A1, small fragment

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004330.2 Reference assembly

      Range
      222271..224156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351886.1 → XP_001351922.1  replication protein A1, small fragment [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351922.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V5Y1, A0A024W8B5, A0A024WRM1, A0A024X8M0, A0A0L1I3V8, A0A0L7K4V0, A0A0L7LWQ8, Q8I3A1, W4IHR1, W4J5N2, W7FQV0, W7JPD6, W7KG26
      Conserved Domains (1) summary
      TIGR00617
      Location:10 → 455
      rpa1; replication factor-a protein 1 (rpa1)
    Nucleotide Protein
    Heading Accession and Version

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