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    RBFOX3 RNA binding fox-1 homolog 3 [ Homo sapiens (human) ]

    Gene ID: 146713, updated on 28-Oct-2024

    Summary

    Official Symbol
    RBFOX3provided by HGNC
    Official Full Name
    RNA binding fox-1 homolog 3provided by HGNC
    Primary source
    HGNC:HGNC:27097
    See related
    Ensembl:ENSG00000167281 MIM:616999; AllianceGenome:HGNC:27097
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FOX3; NEUN; FOX-3; HRNBP3
    Summary
    This gene encodes a member of the RNA-binding FOX protein family which is involved in the regulation of alternative splicing of pre-mRNA. The protein has an N-terminal proline-rich region, an RNA recognition motif (RRM) domain, and a C-terminal alanine-rich region. This gene produces the neuronal nuclei (NeuN) antigen that has been widely used as a marker for post-mitotic neurons. This gene has its highest expression in the central nervous system and plays a prominent role in neural tissue development and regulation of adult brain function. Mutations in this gene have been associated with numerous neurological disorders. Alternative splicing of this gene results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, May 2017]
    Expression
    Biased expression in brain (RPKM 11.3), prostate (RPKM 4.9) and 4 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RBFOX3 in Genome Data Viewer
    Location:
    17q25.3
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (79089345..79665571, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (79984286..80563418, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (77085427..77632826, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9078 Neighboring gene C1QTNF1 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77040047-77040547 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:77042736-77043935 Neighboring gene Sharpr-MPRA regulatory region 5335 Neighboring gene C1q and TNF related 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9079 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77094193-77094906 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77099175-77100160 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77112846-77113750 Neighboring gene endo-beta-N-acetylglucosaminidase Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77157651-77158151 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77173286-77173965 Neighboring gene uncharacterized LOC124904069 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77179359-77180239 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9080 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77188893-77189550 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77198565-77199383 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77207229-77207739 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77219238-77219738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77219739-77220239 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77223705-77224476 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77362366-77362866 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:77369816-77369979 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:77397348-77397522 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77400039-77400540 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77403781-77404282 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77404283-77404782 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77409324-77409841 Neighboring gene Sharpr-MPRA regulatory region 4769 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77505025-77505682 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77528471-77529242 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77529243-77530014 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77544533-77545032 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77645285-77645791 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77655553-77656543 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77657995-77658740 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77665156-77666000 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47566 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77669291-77669891 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12917 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77673338-77673922 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77675499-77676019 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77680917-77681538 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:77681539-77682160 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:77684903-77685452 Neighboring gene long intergenic non-protein coding RNA 2078 Neighboring gene microRNA 4739

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.
    EBI GWAS Catalog

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Tat tat HIV-1 Tat downregulates the expression of RBFOX3/NEUN in human neurons PubMed

    Go to the HIV-1, Human Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ44838, FLJ56884, FLJ58356, MGC176616

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of alternative mRNA splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    RNA binding protein fox-1 homolog 3
    Names
    RNA binding protein, fox-1 homolog 3
    fox-1 homolog C
    hexaribonucleotide binding protein 3
    neuN antigen
    neuronal nuclei antigen

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_053112.2 RefSeqGene

      Range
      59520..581226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001082575.3NP_001076044.1  RNA binding protein fox-1 homolog 3 isoform 1

      See identical proteins and their annotated locations for NP_001076044.1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Related
      ENSP00000463653.1, ENST00000580155.5
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    2. NM_001350451.2NP_001337380.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Related
      ENSP00000510395.1, ENST00000693108.1
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    3. NM_001350453.2NP_001337382.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    4. NM_001385804.1NP_001372733.1  RNA binding protein fox-1 homolog 3 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    5. NM_001385805.1NP_001372734.1  RNA binding protein fox-1 homolog 3 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    6. NM_001385806.1NP_001372735.1  RNA binding protein fox-1 homolog 3 isoform 4

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (4) summary
      PRK13335
      Location:2485
      PRK13335; superantigen-like protein SSL3; Reviewed
      COG0724
      Location:71231
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:207343
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    7. NM_001385807.1NP_001372736.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    8. NM_001385808.1NP_001372737.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    9. NM_001385809.1NP_001372738.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    10. NM_001385810.1NP_001372739.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    11. NM_001385811.1NP_001372740.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    12. NM_001385812.1NP_001372741.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    13. NM_001385813.1NP_001372742.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    14. NM_001385814.1NP_001372743.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Related
      ENSP00000497797.1, ENST00000648001.1
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    15. NM_001385815.1NP_001372744.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    16. NM_001385816.1NP_001372745.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    17. NM_001385817.1NP_001372746.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    18. NM_001385818.1NP_001372747.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    19. NM_001385819.1NP_001372748.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    20. NM_001385820.1NP_001372749.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    21. NM_001385821.1NP_001372750.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92410.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, A0A8I5KWJ3
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    22. NM_001385822.1NP_001372751.1  RNA binding protein fox-1 homolog 3 isoform 5

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92408.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, J3QRF4
      Related
      ENSP00000464186.1, ENST00000583458.5
      Conserved Domains (4) summary
      PRK13335
      Location:2485
      PRK13335; superantigen-like protein SSL3; Reviewed
      COG0724
      Location:71231
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:207343
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    23. NM_001385823.1NP_001372752.1  RNA binding protein fox-1 homolog 3 isoform 5

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92408.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, J3QRF4
      Conserved Domains (4) summary
      PRK13335
      Location:2485
      PRK13335; superantigen-like protein SSL3; Reviewed
      COG0724
      Location:71231
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:207343
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    24. NM_001385824.1NP_001372753.1  RNA binding protein fox-1 homolog 3 isoform 6

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS92409.1
      UniProtKB/TrEMBL
      A0A3B3ITL7, J3QQZ2
      Related
      ENSP00000463964.1, ENST00000582043.5
      Conserved Domains (3) summary
      COG0724
      Location:27133
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:177313
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99138
      RRM_SF; RNA recognition motif (RRM) superfamily
    25. NM_001385825.1NP_001372754.1  RNA binding protein fox-1 homolog 3 isoform 7

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Related
      ENSP00000462007.1, ENST00000584778.5
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    26. NM_001385826.1NP_001372755.1  RNA binding protein fox-1 homolog 3 isoform 7

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    27. NM_001385827.1NP_001372756.1  RNA binding protein fox-1 homolog 3 isoform 9

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27239
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:215304
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    28. NM_001385828.1NP_001372757.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    29. NM_001385829.1NP_001372758.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    30. NM_001385830.1NP_001372759.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    31. NM_001385831.1NP_001372760.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    32. NM_001385832.1NP_001372761.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    33. NM_001385833.1NP_001372762.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    34. NM_001385834.1NP_001372763.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    35. NM_001385835.1NP_001372764.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    36. NM_001385836.1NP_001372765.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    37. NM_001385837.1NP_001372766.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    38. NM_001385838.1NP_001372767.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    39. NM_001385839.1NP_001372768.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    40. NM_001385840.1NP_001372769.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    41. NM_001385841.1NP_001372770.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    42. NM_001385842.1NP_001372771.1  RNA binding protein fox-1 homolog 3 isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Consensus CDS
      CCDS45805.1
      UniProtKB/Swiss-Prot
      A6NFN3, B4DEG6, B4DF29
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    43. NM_001385843.1NP_001372772.1  RNA binding protein fox-1 homolog 3 isoform 8

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      TIGR01661
      Location:25169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207296
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    44. NM_001385844.1NP_001372773.1  RNA binding protein fox-1 homolog 3 isoform 8

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      TIGR01661
      Location:25169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207296
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    45. NM_001385845.1NP_001372774.1  RNA binding protein fox-1 homolog 3 isoform 8

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      TIGR01661
      Location:25169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207296
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    46. NM_001385846.1NP_001372775.1  RNA binding protein fox-1 homolog 3 isoform 8

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      TIGR01661
      Location:25169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207296
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:98173
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    47. NM_001385847.1NP_001372776.1  RNA binding protein fox-1 homolog 3 isoform 10

      Status: REVIEWED

      Source sequence(s)
      AC020689, AC021534, AC055858, AC073624, AC233701
      Conserved Domains (3) summary
      PRK10927
      Location:23155
      PRK10927; cell division protein FtsN
      pfam12414
      Location:159248
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99120
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      79089345..79665571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047435405.1XP_047291361.1  RNA binding protein fox-1 homolog 3 isoform X5

    2. XM_017024211.3XP_016879700.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      COG0724
      Location:27133
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:177266
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99138
      RRM_SF; RNA recognition motif (RRM) superfamily
    3. XM_024450593.2XP_024306361.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    4. XM_024450592.2XP_024306360.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    5. XM_017024208.2XP_016879697.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    6. XM_011524366.3XP_011522668.1  RNA binding protein fox-1 homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      PRK13335
      Location:2485
      PRK13335; superantigen-like protein SSL3; Reviewed
      smart00360
      Location:99169
      RRM; RNA recognition motif
      COG0724
      Location:71231
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    7. XM_011524367.3XP_011522669.1  RNA binding protein fox-1 homolog 3 isoform X4

      Conserved Domains (3) summary
      COG0724
      Location:27133
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:177266
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99138
      RRM_SF; RNA recognition motif (RRM) superfamily
    8. XM_017024209.2XP_016879698.1  RNA binding protein fox-1 homolog 3 isoform X2

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27133
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:177313
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99138
      RRM_SF; RNA recognition motif (RRM) superfamily
    9. XM_011524360.2XP_011522662.1  RNA binding protein fox-1 homolog 3 isoform X1

      See identical proteins and their annotated locations for XP_011522662.1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    10. XM_024450596.2XP_024306364.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins
    11. XM_024450595.2XP_024306363.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A3B3ITL7
      Conserved Domains (3) summary
      COG0724
      Location:27232
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:208344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      79984286..80563418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054315132.1XP_054171107.1  RNA binding protein fox-1 homolog 3 isoform X5

    2. XM_054315131.1XP_054171106.1  RNA binding protein fox-1 homolog 3 isoform X5

    3. XM_054315122.1XP_054171097.1  RNA binding protein fox-1 homolog 3 isoform X1

    4. XM_054315125.1XP_054171100.1  RNA binding protein fox-1 homolog 3 isoform X1

    5. XM_054315127.1XP_054171102.1  RNA binding protein fox-1 homolog 3 isoform X1

    6. XM_054315129.1XP_054171104.1  RNA binding protein fox-1 homolog 3 isoform X3

    7. XM_054315130.1XP_054171105.1  RNA binding protein fox-1 homolog 3 isoform X4

    8. XM_054315128.1XP_054171103.1  RNA binding protein fox-1 homolog 3 isoform X2

    9. XM_054315126.1XP_054171101.1  RNA binding protein fox-1 homolog 3 isoform X1

    10. XM_054315124.1XP_054171099.1  RNA binding protein fox-1 homolog 3 isoform X1

    11. XM_054315123.1XP_054171098.1  RNA binding protein fox-1 homolog 3 isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001025448.1: Suppressed sequence

      Description
      NM_001025448.1: This RefSeq was permanently suppressed because it contains the wrong CDS.
    2. NM_001039904.1: Suppressed sequence

      Description
      NM_001039904.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.