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    LOC105370832 uncharacterized LOC105370832 [ Homo sapiens (human) ]

    Gene ID: 105370832, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105370832
    Gene description
    uncharacterized LOC105370832
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370832 in Genome Data Viewer
    Location:
    15q21.3
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (56479507..56605596, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (54282362..54408752, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene testis expressed 9 Neighboring gene high mobility group box 1 pseudogene 33 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9451 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9452 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9453 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9454 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6465 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9455 Neighboring gene Sharpr-MPRA regulatory region 15328 Neighboring gene meiosis specific nuclear structural 1 Neighboring gene zinc finger protein 280D Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40335 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9456 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6466 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40373 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40379 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40384 Neighboring gene acyl-CoA binding domain containing 7 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      56479507..56605596 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007064649.1 RNA Sequence

    2. XR_001751770.2 RNA Sequence

    3. XR_007064650.1 RNA Sequence

    4. XR_007064652.1 RNA Sequence

    5. XR_007064651.1 RNA Sequence

    6. XR_002957754.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      54282362..54408752 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085552.1 RNA Sequence

    2. XR_007085556.1 RNA Sequence

    3. XR_007085555.1 RNA Sequence

    4. XR_007085554.1 RNA Sequence

    5. XR_007085553.1 RNA Sequence

    6. XR_007085557.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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