U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PAGE2B PAGE family member 2B [ Homo sapiens (human) ]

    Gene ID: 389860, updated on 10-Oct-2024

    Summary

    Official Symbol
    PAGE2Bprovided by HGNC
    Official Full Name
    PAGE family member 2Bprovided by HGNC
    Primary source
    HGNC:HGNC:31805
    See related
    Ensembl:ENSG00000238269 AllianceGenome:HGNC:31805
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CT16.5; GAGEE3; PAGE-2B
    Expression
    Restricted expression toward testis (RPKM 8.7) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PAGE2B in Genome Data Viewer
    Location:
    Xp11.21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (55028117..55078909)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (54321243..54372032)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (55101463..55105342)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chrX:54962395-54962556 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:54977103-54977603 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20865 Neighboring gene Sharpr-MPRA regulatory regions 2439 and 5762 Neighboring gene ALAS2 intronic erythroid enhancer Neighboring gene apurinic/apyrimidinic endodeoxyribonuclease 2 Neighboring gene ALAS2 intron 1 and 3 erythroid regulatory elements Neighboring gene 5'-aminolevulinate synthase 2 Neighboring gene HDGFL3 pseudogene 1 Neighboring gene PAGE family member 2 Neighboring gene CRISPRi-validated cis-regulatory element chrX.1184 Neighboring gene component of oligomeric golgi complex 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    putative G antigen family E member 3
    Names
    G antigen, family E, 3
    P antigen family, member 2B
    prostate-associated gene 2B protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001015038.3NP_001015038.1  putative G antigen family E member 3

      See identical proteins and their annotated locations for NP_001015038.1

      Status: VALIDATED

      Source sequence(s)
      AL590240, BM782405, HY192793
      Consensus CDS
      CCDS35304.1
      UniProtKB/Swiss-Prot
      A1L414, Q5JRK9
      UniProtKB/TrEMBL
      Q5JRL0
      Related
      ENSP00000364110.1, ENST00000374971.2
      Conserved Domains (1) summary
      pfam05831
      Location:1107
      GAGE; GAGE protein

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      55028117..55078909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011530785.3XP_011529087.1  putative G antigen family E member 3 isoform X1

      See identical proteins and their annotated locations for XP_011529087.1

      Conserved Domains (1) summary
      pfam05831
      Location:24133
      GAGE; GAGE protein
    2. XM_011530786.4XP_011529088.1  putative G antigen family E member 3 isoform X2

      See identical proteins and their annotated locations for XP_011529088.1

      UniProtKB/TrEMBL
      Q5JRL0
      Conserved Domains (1) summary
      pfam05831
      Location:6115
      GAGE; GAGE protein
    3. XM_017029513.2XP_016885002.1  putative G antigen family E member 3 isoform X3

      UniProtKB/Swiss-Prot
      A1L414, Q5JRK9
      UniProtKB/TrEMBL
      Q5JRL0
      Conserved Domains (1) summary
      pfam05831
      Location:1107
      GAGE; GAGE protein
    4. XM_011530787.3XP_011529089.1  putative G antigen family E member 3 isoform X3

      See identical proteins and their annotated locations for XP_011529089.1

      UniProtKB/Swiss-Prot
      A1L414, Q5JRK9
      UniProtKB/TrEMBL
      Q5JRL0
      Conserved Domains (1) summary
      pfam05831
      Location:1107
      GAGE; GAGE protein

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      54321243..54372032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054327042.1XP_054183017.1  putative G antigen family E member 3 isoform X1

    2. XM_054327043.1XP_054183018.1  putative G antigen family E member 3 isoform X2

    3. XM_054327044.1XP_054183019.1  putative G antigen family E member 3 isoform X3

      UniProtKB/Swiss-Prot
      A1L414, Q5JRK9
    4. XM_054327045.1XP_054183020.1  putative G antigen family E member 3 isoform X3

      UniProtKB/Swiss-Prot
      A1L414, Q5JRK9