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    NBEAP1 neurobeachin pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 606, updated on 17-Sep-2024

    Summary

    Official Symbol
    NBEAP1provided by HGNC
    Official Full Name
    neurobeachin pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:1007
    See related
    MIM:601889; AllianceGenome:HGNC:1007
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BCL8; BCL8A
    Expression
    Biased expression in prostate (RPKM 8.8), testis (RPKM 8.6) and 2 other tissues See more
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    Genomic context

    See NBEAP1 in Genome Data Viewer
    Location:
    15q11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (20669468..20756151, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (18581368..18668315, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (20874797..20961480, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ring finger protein 145 pseudogene Neighboring gene immunoglobulin heavy variable 1/OR15-6 (pseudogene) Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9153 Neighboring gene RNA, U6 small nuclear 498, pseudogene Neighboring gene uncharacterized LOC124903443 Neighboring gene LONRF2 pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • B-cell CLL/lymphoma 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027992.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL832227, DA278599

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      20669468..20756151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_021160017.1 Reference GRCh38.p14 PATCHES

      Range
      911224..997910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      18581368..18668315 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_008857.1: Suppressed sequence

      Description
      NG_008857.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
    2. NG_025281.1: Suppressed sequence

      Description
      NG_025281.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.