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    TRGV5 T cell receptor gamma variable 5 [ Homo sapiens (human) ]

    Gene ID: 6978, updated on 23-Nov-2023

    Summary

    Official Symbol
    TRGV5provided by HGNC
    Official Full Name
    T cell receptor gamma variable 5provided by HGNC
    Primary source
    HGNC:HGNC:12290
    See related
    Ensembl:ENSG00000211697 IMGT/GENE-DB:TRGV5; AllianceGenome:HGNC:12290
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    V1S5; TCRGV5
    Summary
    Predicted to be involved in adaptive immune response and innate immune response. Predicted to be part of T cell receptor complex. Predicted to be active in external side of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

    See TRGV5 in Genome Data Viewer
    Location:
    7p14.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (38349355..38349824, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (38506235..38506704, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (38388956..38389425, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene T cell receptor gamma locus Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25867 Neighboring gene T cell receptor gamma locus antisense RNA 1 Neighboring gene T cell receptor gamma variable 6 (pseudogene) Neighboring gene T cell receptor gamma variable 5P (pseudogene) Neighboring gene T cell receptor gamma variable 4 Neighboring gene T cell receptor gamma variable 3

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • T-cell gamma precursor protein
    • T-cell receptor, gamma, variable region V5

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of T cell receptor complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_001336.2 

      Range
      24124..24593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      38349355..38349824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      38506235..38506704 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)