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TPF view for zebrafish chromosome 23

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TPF revision information

Last updated:
March 16, 2017 at 9:09 AM Eastern Time
By:
SC(sb2)
Version:
117

Patches and alternate loci

  • Purple cell with +P icon: patch component
  • Orange cell with +A icon: alt loci component

Join legend

  • Serious alignment problem, requires review
  • Minor alignment problem
  • Excellent alignment, meets all defined criteria
  • Certificate submitted, not yet approved
  • Certificate submitted and approved
  • Valid, contained clone
  • Join not evaluated due to one accession not being finished
Current TPF view for zebrafish chromosome 23 (v. 117)
Accession Name Contig Center Status Join Align length Gaps Percent identical Comments
   CABZ01074080.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074079.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074078.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074077.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074076.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074075.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074074.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074073.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074072.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074070.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074069.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074068.1 ? WGSCTG875 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074067.1 ? WGSCTG875 MINUS
GAP TYPE-3
CABZ01074082.1 ? WGSCTG876
   GAP TYPE-2 100 PAIRED ENDS
CABZ01074083.1 ? WGSCTG876
GAP TYPE-3
CABZ01031666.1 ? WGSCTG877
GAP TYPE-3
CABZ01078922.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078923.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078924.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078925.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078926.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078927.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078928.1 ? WGSCTG878
   GAP TYPE-2 100 PAIRED ENDS
CABZ01078929.1 ? WGSCTG878
GAP TYPE-3
LO017647.1 CH73-343K14 CTG2126 SC pre 56,642 16 99.981 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
CU571318.6 CH73-162J3 CTG2126 SC fin 2,000 1 100
CU469313.15 CH73-90N13 CTG2126 SC fin 2,000 0 100
   CU929146.14 CH73-181D5 CTG2126 MINUS fin 2,000 0 100
   BX323461.27 DKEYP-44B8 CTG2126 MINUS fin 2,000 0 100
CU062427.18 CH73-130B20 CTG2126 SC fin 100 0 100 alignment length < 2000
BX470184.10 CH211-214H13 CTG2126 SC fin 2,442 3 99.222 identity < 99.6%
CABZ01052955.1 ? CTG2126 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01052956.1 ? CTG2126
   GAP TYPE-2 100 PAIRED ENDS
CABZ01052957.1 ? CTG2126
   GAP TYPE-2 100 PAIRED ENDS
CABZ01052958.1 ? CTG2126
   GAP TYPE-2 100 PAIRED ENDS
CABZ01052959.1 ? CTG2126
   GAP TYPE-2 100 PAIRED ENDS
CABZ01052960.1 ? CTG2126 None wgs 33,510 5 99.967
   CU927920.7 CH73-205C16 CTG2126 MINUS fin
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01063937.1 ? CTG2126 MINUS wgs 4,640 3 100 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more
FO704759.2 CH1073-890K2 CTG2126 SC pre 1,174 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
CU634021.8 CH73-96B22 CTG2126 SC fin 19,779 263 97.406 approved certificate; >0 gap of 500bp or more, not simple sequence; identity < 98%
CU929208.5 ZFOS-905G2 CTG2126 SC fin 100 0 98.000 identity < 99.6%; alignment length < 2000
CU928156.5 CH1073-272J17 CTG2126 SC fin 4,632 1 100
   CABZ01063923.1 ? CTG2126 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01063922.1 ? CTG2126 MINUS
GAP TYPE-3
CABZ01079869.1 ? WGSCTG879
   GAP TYPE-2 100 PAIRED ENDS
CABZ01079870.1 ? WGSCTG879
   GAP TYPE-2 100 PAIRED ENDS
CABZ01079871.1 ? WGSCTG879
   GAP TYPE-2 100 PAIRED ENDS
CABZ01079872.1 ? WGSCTG879
   GAP TYPE-2 100 PAIRED ENDS
CABZ01079873.1 ? WGSCTG879
GAP TYPE-3
CABZ01080623.1 ? WGSCTG880
   GAP TYPE-2 100 PAIRED ENDS
CABZ01080624.1 ? WGSCTG880
   GAP TYPE-2 100 PAIRED ENDS
CABZ01080625.1 ? WGSCTG880
   GAP TYPE-2 100 PAIRED ENDS
CABZ01080626.1 ? WGSCTG880
GAP TYPE-3
CABZ01081557.1 ? WGSCTG881
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01081558.1 ? WGSCTG881 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081559.1 ? WGSCTG881
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081560.1 ? WGSCTG881
GAP TYPE-3
   CABZ01080189.1 ? WGSCTG882 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080188.1 ? WGSCTG882 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080187.1 ? WGSCTG882 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080186.1 ? WGSCTG882 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080185.1 ? WGSCTG882 MINUS
GAP TYPE-3
CABZ01074571.1 ? CTG2127
   GAP TYPE-2 100 PAIRED ENDS
CABZ01074572.1 ? CTG2127
   GAP TYPE-2 100 PAIRED ENDS
CABZ01074573.1 ? CTG2127 None wgs 2,726 5 98.386 half-dovetail of >50bp
   CR376840.30 CH211-185M11 CTG2127 MINUS fin
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078121.1 ? CTG2127 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078120.1 ? CTG2127 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078119.1 ? CTG2127 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078118.1 ? CTG2127 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078117.1 ? CTG2127 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078123.1 ? CTG2127 MINUS wgs 1,511 0 99.868 alignment length < 2000
CU929097.4 CH73-284A16 CTG2127 SC fin 6 0 N/A approved certificate; no overlap present
CU683878.15 CH73-359N6 CTG2127 SC fin 2,000 0 100
   CU633902.6 CH1073-93E12 CTG2127 MINUS fin 10,034 2 100
CU633850.4 CH1073-154C4 CTG2127 SC fin 2,000 0 100
CU633915.6 CH1073-75K1 CTG2127 SC fin 2,000 0 100
   LO017896.1 ZFOS-2136F2 CTG2127 CONTAINED_TURNOUT in CABZ01078101.1 fin 11,510 0 100 contained sequence
   CABZ01078101.1 ? CTG2127 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078100.1 ? CTG2127 MINUS
GAP TYPE-3
   CABZ01072764.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01072763.1 ? CTG10150 MINUS wgs 8,201 1 99.988 half-dovetail of >0bp and <=50bp
   CU693481.9 CH73-212E20 CTG10150 MINUS fin 2,000 0 100
   CU651661.6 CH1073-130M24 CTG10150 MINUS fin 2,000 0 100
   CU855582.11 CH73-218L21 CTG10150 MINUS fin 6,255 0 99.984 alignment exists; one or more unfinished sequences
LO017686.1 CH1073-881I10 CTG10150 SC pre 6,151 1 99.984 alignment exists; one or more unfinished sequences
CABZ01055516.1 ? CTG10150 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01055517.1 ? CTG10150
   GAP TYPE-2 100 PAIRED ENDS
CABZ01055518.1 ? CTG10150
   GAP TYPE-2 100 PAIRED ENDS
CABZ01055519.1 ? CTG10150
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060135.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060134.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060133.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060132.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060131.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060130.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060129.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060128.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060127.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060126.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060125.1 ? CTG10150 MINUS wgs 10,180 0 99.990 alignment exists; one or more unfinished sequences
   LO017828.2 CH1073-478A3 CTG10150 MINUS pre 7,072 0 100 alignment exists; one or more unfinished sequences
   CABZ01060121.1 ? CTG10150 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01060120.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048685.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048684.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048683.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048682.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048681.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048680.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048679.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048678.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048677.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048676.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048675.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048674.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048673.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048672.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048671.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048670.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048669.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048668.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048667.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048666.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048665.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01048664.1 ? CTG10150 MINUS wgs 2,409 0 100 alignment exists; one or more unfinished sequences
LO018513.1 CH73-234B14 CTG10150 SC pre 10,886 1 99.991 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
LO017827.2 CH1073-185E7 CTG10150 SC pre 16,219 8 99.982 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
   LO017835.1 CH1073-870D16 CTG10150 MINUS pre 1,183 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
   CABZ01057943.1 ? CTG10150 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057942.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057941.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057940.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057939.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057938.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057937.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057936.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057935.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057934.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057933.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057932.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057931.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057930.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057929.1 ? CTG10150 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057928.1 ? CTG10150 MINUS
GAP TYPE-3
CABZ01092918.1 ? WGSCTG883
   GAP TYPE-2 100 PAIRED ENDS
CABZ01092919.1 ? WGSCTG883
   GAP TYPE-2 100 PAIRED ENDS
CABZ01092920.1 ? WGSCTG883
   GAP TYPE-2 100 PAIRED ENDS
CABZ01092921.1 ? WGSCTG883
GAP TYPE-3
   CABZ01086381.1 ? CTG10337 MINUS wgs 4,778 5 99.728
   CU861507.3 CH1073-186H16 CTG10337 MINUS fin 2,000 0 100
   CU929179.4 CH1073-369F3 CTG10337 MINUS fin 1,999 1 100 alignment length < 2000
   CU929044.5 CH1073-85D8 CTG10337 MINUS fin 2,000 0 100
   CU633907.4 CH1073-213L17 CTG10337 MINUS fin 34,355 5 99.991
   CABZ01086376.1 ? CTG10337 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01086375.1 ? CTG10337 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01086374.1 ? CTG10337 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01086373.1 ? CTG10337 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01106133.1 ? CTG10337
   GAP TYPE-2 100 PAIRED ENDS
CU651593.6 CH1073-154M12 CTG10337 SC fin 2,000 0 100
CU633851.5 CH1073-161C3 CTG10337 SC fin 26,143 121 98.038 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
   FO704865.1 ZFOS-1147E11 CTG10337 MINUS pre 562 4 96.441 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; identity < 98%
   CABZ01100040.1 ? CTG10337 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01100039.1 ? CTG10337 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01100038.1 ? CTG10337 MINUS
GAP TYPE-3
   CABZ01028956.1 ? CTG2129 MINUS wgs 11,562 3 99.870 half-dovetail of >50bp
   FP067435.3 CH1073-164F17 CTG2129 MINUS fin 19,826 12 99.607
   AL954726.31 CH211-274A9 CTG2129 MINUS fin 6,720 2 99.747
   CABZ01028951.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028950.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028949.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028948.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028947.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028946.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028945.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028944.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028943.1 ? CTG2129 MINUS wgs 5,434 4 99.982 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
FO834925.2 CH1073-238A13 CTG2129 SC pre 15,835 0 100 alignment exists; one or more unfinished sequences
CU683869.15 CH73-310M9 CTG2129 SC fin 2,000 0 100
CU681844.16 CH73-356P16 CTG2129 SC fin 14,597 2 100 half-dovetail of >50bp
   CABZ01028922.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028921.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028920.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028919.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028918.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028917.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028916.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028915.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01028914.1 ? CTG2129 MINUS wgs 354 0 100 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
FQ323101.6 CH1073-119O16 CTG2129 SC pre 2,000 0 100 alignment exists; one or more unfinished sequences
FQ377592.4 CH1073-150K24 CTG2129 SC fin 2,000 0 100
FQ323112.5 CH1073-236B17 CTG2129 SC fin 2,000 0 100
CR759920.13 DKEY-9L20 CTG2129 SC fin 100 0 100 alignment length < 2000
CR847526.7 DKEY-226K3 CTG2129 SC fin 2,000 0 100
CU861894.12 CH73-250P19 CTG2129 SC fin 2,000 0 100
   CU682640.4 CH73-64H14 CTG2129 MINUS fin 2,000 0 99.500 identity < 99.6%
FP102158.5 ZFOS-1467C10 CTG2129 SC fin 1,000 0 98.500 identity < 99.6%; alignment length < 2000
CU694203.5 CH1073-525H16 CTG2129 SC fin 2,000 0 100
CU683896.7 CH1073-452P23 CTG2129 SC fin 2,000 0 100
   CU633883.7 CH1073-128F11 CTG2129 CONTAINED_TURNOUT in FO904827.3 fin 12,844 2 100 alignment exists; one or more unfinished sequences; contained sequence
FO904827.3 CH1073-392E1 CTG2129 SC pre 7,072 23 98.148 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more
FP017188.5 ZFOS-441B8 CTG2129 SC fin 2,000 3 98.950 identity < 99.6%
   FP017154.5 CH1073-356I16 CTG2129 MINUS fin 2,000 0 100
FQ323119.4 CH1073-317K16 CTG2129 SC fin 2,000 0 100
FQ377965.6 ZFOS-2028F4 CTG2129 SC fin 2,000 0 100
AL954866.11 CH211-10D23 CTG2129 SC fin 2,000 0 100
BX322537.14 CH211-262H21 CTG2129 SC fin 2,000 0 100
CU571072.5 CH73-142C19 CTG2129 SC fin 5,370 2 99.963 >0 gap of 50bp or more, not simple sequence
CABZ01046266.1 ? CTG2129 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01046267.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01046268.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01046269.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01046270.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01046271.1 ? CTG2129 None wgs 7,411 0 99.852 alignment exists; one or more unfinished sequences
LO017692.1 ZFOS-1602H10 CTG2129 SC pre 25,991 0 99.996 alignment exists; one or more unfinished sequences
LO017693.2 CH1073-190F8 CTG2129 SC pre 29,850 10 99.990 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
LO017700.1 CH73-387I15 CTG2129 SC pre 38,926 8 99.956 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
   LO017712.2 CH73-308B21 CTG2129 MINUS pre 27,564 1 100 alignment exists; one or more unfinished sequences
   CU571070.6 CH1073-66C17 CTG2129 MINUS fin 5,280 0 99.981 half-dovetail of >0bp and <=50bp
CABZ01046288.1 ? CTG2129 None wgs
   GAP TYPE-2 100 OPTICAL MAP
   CABZ01066947.1 ? CTG2129 MINUS wgs 10,736 3 99.851 alignment exists; one or more unfinished sequences; half-dovetail of >0bp and <=50bp
   FO818741.2 CH1073-833H13 CTG2129 MINUS pre 18,481 2 100 alignment exists; one or more unfinished sequences
   CU468010.12 CH1073-264N4 CTG2129 MINUS fin 1,931 1 100 alignment length < 2000
   CU468827.9 CH73-126I7 CTG2129 MINUS fin 1,998 1 100 alignment length < 2000
   CR354596.12 CH211-117K14 CTG2129 MINUS fin 5,324 0 100 alignment exists; one or more unfinished sequences
FO904829.3 CH1073-417M2 CTG2129 SC pre 4,695 0 99.957 alignment exists; one or more unfinished sequences; half-dovetail of >0bp and <=50bp
   CABZ01077324.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070389.1 ? CTG2129 MINUS wgs 13,381 7 99.933 alignment exists; one or more unfinished sequences
FO904981.1 CH1073-153K1 CTG2129 SC pre 15,047 3 99.880 alignment exists; one or more unfinished sequences; half-dovetail of >0bp and <=50bp
   CABZ01070384.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070383.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070382.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070381.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070380.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070379.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070378.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070377.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   FO704826.2 ZFOS-121H8 CTG2129 MINUS pre 34,733 6 100 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
   FO904870.1 ZFOS-615E11 CTG2129 MINUS pre
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030035.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030034.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030033.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030032.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030031.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030030.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030029.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030028.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030027.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030026.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030025.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01030024.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01030037.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01030038.1 ? CTG2129
   GAP TYPE-2 100 PAIRED ENDS
CABZ01030039.1 ? CTG2129 None wgs 7,705 3 99.844 alignment exists; one or more unfinished sequences
FO904830.1 CH1073-502G12 CTG2129 SC pre 14,699 2 100 alignment exists; one or more unfinished sequences
   CR936540.12 DKEYP-116F3 CTG2129 MINUS fin 88,988 837 98.067 approved certificate; >0 gap of 500bp or more, not simple sequence
   BX897734.11 CH211-194J14 CTG2129 MINUS fin 10,263 52 98.158 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
FO904849.2 CH73-195F6 CTG2129 SC pre 10,531 2 99.962 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
   CABZ01117607.1 ? CTG2129 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01117606.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026182.1 ? CTG2129 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026181.1 ? CTG2129 MINUS wgs 14,656 1 100 half-dovetail of >50bp
   CU928303.2 CH73-187I15 CTG2129 MINUS fin 29,591 141 97.739 approved certificate; >0 gap of 500bp or more, not simple sequence; identity < 98%
   CT025929.13 CH211-252P8 CTG2129 MINUS fin 4,980 9 98.855 identity < 99.6%
   CABZ01026153.1 ? CTG2129 MINUS wgs
GAP TYPE-3
   CABZ01026152.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026151.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026150.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026149.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026148.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026147.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026146.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026145.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026144.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026143.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026142.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026141.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026140.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026139.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026138.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026137.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026136.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026135.1 ? CTG2135 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01026134.1 ? CTG2135 MINUS wgs 2,579 1 100 alignment exists; one or more unfinished sequences
FO834854.2 CH1073-115H8 CTG2135 SC pre 3,697 0 100 alignment exists; one or more unfinished sequences
   CU468918.8 CH211-41B11 CTG2135 MINUS fin 2,000 0 100
BX248496.13 CH211-236J4 CTG2135 SC fin 9,390 0 100
   BX323087.9 CH211-212J22 CTG2135 MINUS fin 2,000 0 100
   CR339064.10 CH211-152J3 CTG2135 MINUS fin 2,000 0 100
   CR933738.4 CH211-192F7 CTG2135 MINUS fin 2,000 0 100
CR450824.10 CH211-147F12 CTG2135 SC fin 100 1 100 alignment length < 2000
   FP102118.4 CH1073-264L15 CTG2135 MINUS fin 2,000 0 100
FP102169.12 CH73-56F13 CTG2135 SC fin 2,000 0 100
   BX005466.8 CH211-117C9 CTG2135 MINUS fin 2,000 0 100
CU681838.7 CH73-232F3 CTG2135 SC fin 2,000 0 100
   CT573484.6 CH73-300I17 CTG2135 MINUS fin 2,000 0 100
CR589876.8 DKEY-53I3 CTG2135 SC fin 33,994 5 99.997 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
FO904832.2 CH73-267M24 CTG2135 SC pre 8,052 1 99.913 alignment exists; one or more unfinished sequences
CU459190.4 CH73-151H24 CTG2135 SC fin 2,000 0 100
   BX323800.8 DKEYP-73A2 CTG2135 MINUS fin 2,000 0 100
CR936952.9 CH211-200E2 CTG2135 SC fin 2,000 0 100
CU633736.9 CH211-156D2 CTG2135 SC fin 2,000 0 100
CU855951.4 CH1073-408B19 CTG2135 SC fin 2,000 0 100
CU914163.6 CH211-254L12 CTG2135 SC fin 83,108 8 99.980 alignment exists; one or more unfinished sequences; >0 gap of 25bp or more, not simple sequence
FO904971.2 CH211-124H16 CTG2135 SC pre 34,941 1 100 alignment exists; one or more unfinished sequences
BX005278.8 CH211-194P15 CTG2135 SC fin 2,000 0 100
   CR391964.7 DKEY-269O15 CTG2135 MINUS fin 2,000 0 100
   AL627126.5 RP71-1J21 CTG2135 MINUS fin 2,000 0 100
   FP245446.7 CH73-275N4 CTG2135 MINUS fin 6,543 2 100 alignment exists; one or more unfinished sequences
FO704896.2 CH73-94M18 CTG2135 SC pre 2,608 0 100 alignment exists; one or more unfinished sequences
   CABZ01039879.1 ? CTG2135 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
LO017810.1 CH1073-281J13 CTG2135 SC pre
   CU896642.5 CH73-367H9 CTG2135 CONTAINED_TURNOUT in LO017810.1 fin 11,180 2 100 alignment exists; one or more unfinished sequences; contained sequence
   CT737208.13 DKEY-257L6 CTG2135 MINUS fin 5,547 3 99.964 >0 gap of 50bp or more, not simple sequence
   CABZ01039864.1 ? CTG2135 MINUS wgs
GAP TYPE-3
CABZ01016236.1 ? WGSCTG884
   GAP TYPE-2 100 PAIRED ENDS
CABZ01016237.1 ? WGSCTG884
   GAP TYPE-2 100 PAIRED ENDS
CABZ01016238.1 ? WGSCTG884
GAP TYPE-3
   CABZ01078632.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078631.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078630.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078629.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078628.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078627.1 ? WGSCTG885 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007229.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007230.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007231.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007232.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007233.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007234.1 ? WGSCTG885
   GAP TYPE-2 100 PAIRED ENDS
CABZ01007235.1 ? WGSCTG885
GAP TYPE-3
CABZ01062974.1 ? CTG1464
   GAP TYPE-2 100 PAIRED ENDS
CABZ01062975.1 ? CTG1464
   GAP TYPE-2 100 PAIRED ENDS
CABZ01062976.1 ? CTG1464
   GAP TYPE-2 100 PAIRED ENDS
CABZ01062977.1 ? CTG1464
   GAP TYPE-2 100 PAIRED ENDS
CABZ01062978.1 ? CTG1464 None wgs 4,993 1 99.960 alignment exists; one or more unfinished sequences
FO818693.2 CH1073-269A11 CTG1464 SC pre 6,644 1 100 alignment exists; one or more unfinished sequences
CT025851.12 CH211-86I10 CTG1464 SC fin 2,000 0 100
   CR457456.7 CH211-235F6 CTG1464 MINUS fin 2,000 0 100
CU467985.15 CH73-26N20 CTG1464 SC fin 1,934 1 100 alignment length < 2000
CR847525.15 DKEY-223D9 CTG1464 SC fin 2,000 0 100
CT027560.6 DKEY-66G10 CTG1464 SC fin 2,000 0 100
CU137717.8 CH73-268E11 CTG1464 SC fin 2,000 0 100
BX511246.4 DKEY-238D17 CTG1464 SC fin 2,000 0 100
BX470099.5 DKEY-14P11 CTG1464 SC fin 2,000 0 100
CR388392.7 DKEY-204F1 CTG1464 SC fin 2,000 0 100
CU466281.8 CH73-78G5 CTG1464 SC fin 2,000 0 100
BX324190.13 CH211-220I18 CTG1464 SC fin 2,000 0 100
CR735105.10 DKEY-202E11 CTG1464 SC fin 2,000 0 100
CR352294.8 CH211-188C24 CTG1464 SC fin 2,000 0 100
CR450756.4 CH211-133J6 CTG1464 SC fin 2,000 0 100
BX511107.3 CH211-117I13 CTG1464 SC fin 2,000 0 100
BX323028.6 DKEY-211A8 CTG1464 SC fin 2,000 0 100
CR388366.12 DKEY-260B22 CTG1464 SC fin 2,000 0 100
CU467835.7 CH211-55G5 CTG1464 SC fin 2,000 0 100
CT027567.10 DKEY-31E3 CTG1464 SC fin 2,000 0 100
CR354544.14 CH211-273A21 CTG1464 SC fin 55,464 7 100
   CT573319.18 DKEY-3K23 CTG1464 MINUS fin 1,379 0 100 alignment length < 2000
   BX548247.6 DKEY-177G18 CTG1464 MINUS fin 2,000 0 100
CU929309.4 CH1073-458I1 CTG1464 SC fin 23,642 1 100
CU929432.4 CH73-67N22 CTG1464 SC fin 2,000 0 100
CR388030.29 DKEY-39A2 CTG1464 SC fin 2,000 0 100
CR394523.19 DKEY-56E24 CTG1464 SC fin 2,000 0 100
   CR394557.6 CH211-247H9 CTG1464 MINUS fin 66,561 5 100
CR735125.12 DKEY-178K16 CTG1464 SC fin 2,000 0 100
   AL929345.15 DKEY-211H10 CTG1464 MINUS fin 2,000 0 100
   BX928747.5 DKEY-153K24 CTG1464 MINUS fin 2,000 0 100
   AL928967.9 CH211-153A8 CTG1464 MINUS fin 2,000 0 100
CU896643.5 CH73-338L23 CTG1464 SC fin 21,782 9 99.913
   CU683867.4 ZFOS-452G4 CTG1464 MINUS fin 2,000 0 100
   CU683891.4 ZFOS-119B10 CTG1464 CONTAINED_TURNOUT in CABZ01028825.1 fin 22,462 15 99.902 >0 gap of 500bp or more, not simple sequence
CABZ01028825.1 ? CTG1464 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01028826.1 ? CTG1464
GAP TYPE-3
CU571261.6 DKEY-250G20 CTG6352 SC fin 2,000 0 99.950
BX927174.10 DKEY-96F10 CTG6352 SC fin 2,000 0 100
   CT025883.6 CH73-205F24 CTG6352 MINUS fin 2,000 0 100
   CR376802.12 DKEY-150I13 CTG6352 MINUS fin 1,998 1 100 alignment length < 2000
   BX546500.7 DKEY-15L19 CTG6352 MINUS fin 2,000 0 100
   CR318629.4 DKEY-30I24 CTG6352 MINUS fin 2,000 0 100
   CR450832.12 CH211-278F9 CTG6352 MINUS fin 1,976 1 100 alignment length < 2000
   CR749171.10 DKEY-248E12 CTG6352 MINUS fin 2,000 0 100
CR391935.9 DKEY-256K13 CTG6352 SC fin 2,000 0 100
FP067421.4 CH1073-384G11 CTG6352 SC fin 2,000 0 100
CU929459.5 CH73-348F15 CTG6352 SC fin 2,000 0 100
   CU467872.13 CH73-375P2 CTG6352 MINUS fin 2,000 0 100
   BX897727.17 DKEY-90A13 CTG6352 MINUS fin 2,000 0 100
   CR936261.8 DKEY-207A6 CTG6352 MINUS fin 2,000 0 100
   CR936486.7 DKEY-279C17 CTG6352 MINUS fin 2,000 0 100
   CR354537.14 DKEY-12E8 CTG6352 MINUS fin 2,000 0 100
   CR388373.11 DKEY-178O8 CTG6352 MINUS fin 2,000 0 100
   CU062505.11 CH73-386C12 CTG6352 MINUS fin 2,000 0 100
AL590155.9 RP71-79P20 CTG6352 SC fin 2,000 0 100
   CR318666.9 DKEY-78O15 CTG6352 MINUS fin 2,000 1 100
   CT573338.17 DKEY-3A9 CTG6352 MINUS fin 2,000 0 100
   CR352242.13 CH211-218G4 CTG6352 MINUS fin 1,972 1 100 alignment length < 2000
BX537335.12 DKEYP-84G9 CTG6352 SC fin 2,000 0 100
   CR759764.7 DKEY-230I11 CTG6352 MINUS fin 2,000 0 100
   CR854837.11 DKEYP-19H2 CTG6352 MINUS fin 2,000 0 100
   CU104781.6 CH73-280P6 CTG6352 MINUS fin 1,989 5 99.246 half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
BX005011.7 CH211-59F19 CTG6352 SC fin 2,000 0 99.300 identity < 99.6%
   CU468228.2 CH73-114C19 CTG6352 MINUS fin 2,000 0 100
BX511181.13 DKEY-100H5 CTG6352 SC fin 2,000 0 100
   CR376835.6 CH211-59E4 CTG6352 MINUS fin 2,000 0 100
BX511184.11 DKEY-103A3 CTG6352 SC fin 9,212 2 100
   CABZ01063610.1 ? CTG6352 MINUS wgs
GAP TYPE-3
CABZ01031606.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031607.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031608.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031609.1 ? CTG2171 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031610.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031611.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031612.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031613.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031614.1 ? CTG2171 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031615.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031616.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01031617.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01001000.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01001001.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01001002.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
FO722027.1 CH1073-389G4 CTG2171 SC pre 6,286 0 100 alignment exists; one or more unfinished sequences
   AL928725.18 CH211-13O20 CTG2171 MINUS fin 2,000 0 100
CU041345.13 DKEYP-115F6 CTG2171 SC fin 2,000 0 100
CR318668.11 DKEYP-100A5 CTG2171 SC fin 1,998 1 100 alignment length < 2000
BX296551.4 CH211-224L10 CTG2171 SC fin 2,000 0 100
AL732515.15 RP71-1K13 CTG2171 SC fin 2,000 0 100
CR356239.11 DKEY-147F3 CTG2171 SC fin 2,000 0 100
CR318674.9 DKEY-210I3 CTG2171 SC fin 2,000 0 100
BX927275.8 DKEY-108P14 CTG2171 SC fin 2,000 0 100
CR848826.7 CH211-101L24 CTG2171 SC fin 2,000 0 100
CR936263.10 DKEYP-36F6 CTG2171 SC fin 2,000 0 100
BX649300.4 CH211-195I16 CTG2171 SC fin 31,720 3 100
CR407550.9 CH211-280C4 CTG2171 SC fin 2,000 0 100
CU570795.3 CH73-71J11 CTG2171 SC fin 2,000 0 100
CR381647.10 CH211-248G18 CTG2171 SC fin 2,000 0 100
CU234171.6 CH73-390P7 CTG2171 SC fin 2,000 0 100
CR352232.20 DKEY-3L8 CTG2171 SC fin 2,000 0 100
CR339055.8 CH211-67C24 CTG2171 SC fin 2,000 0 100
CR735130.17 DKEY-206F21 CTG2171 SC fin 2,000 0 100
CR354375.8 CH211-272P8 CTG2171 SC fin 2,000 0 100
CT027756.10 DKEY-95F11 CTG2171 SC fin 2,000 0 100
CR847953.10 CH211-209J10 CTG2171 SC fin 1,988 1 100 alignment length < 2000
CR788311.7 DKEY-192I18 CTG2171 SC fin 1,895 1 99.367 identity < 99.6%; alignment length < 2000
CT573332.7 CH73-381F5 CTG2171 SC fin 2,000 0 100
CR388168.14 DKEY-109J17 CTG2171 SC fin 2,000 0 100
   CR385022.10 CH211-63C12 CTG2171 MINUS fin 2,000 0 100
CT573385.8 CH73-289A15 CTG2171 SC fin 2,000 0 100
CR376797.10 CH211-222G5 CTG2171 SC fin 2,000 0 100
CR352234.11 DKEY-93L1 CTG2171 SC fin 2,000 0 100
CT574579.8 DKEY-233H12 CTG2171 SC fin 2,000 0 100
   BX323050.6 DKEYP-1G12 CTG2171 MINUS fin 1,998 1 100 alignment length < 2000
   AL953864.6 DKEY-32E6 CTG2171 MINUS fin 8,952 0 99.955
CR749762.6 RP71-17I16 CTG2171 SC fin 2,000 0 100
CT573445.6 CH73-47M18 CTG2171 SC fin 2,000 0 100
   CR352228.11 CH211-104F13 CTG2171 MINUS fin 2,000 0 100
CR352212.10 CH211-285F10 CTG2171 SC fin 2,000 0 100
   CR339046.11 CH211-112C15 CTG2171 MINUS fin 13,883 0 100 alignment exists; one or more unfinished sequences
FO704751.3 CH73-150L1 CTG2171 SC pre 24,294 3 100 alignment exists; one or more unfinished sequences
CABZ01012261.1 ? CTG2171 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01012262.1 ? CTG2171 None wgs 3,360 7 99.464 half-dovetail of >0bp and <=50bp; identity < 99.6%
BX511141.28 DKEYP-10C6 CTG2171 SC fin 1,999 6 99.400 half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
   CR354562.12 DKEY-25B23 CTG2171 MINUS fin 2,000 0 100
CT027543.11 DKEY-201K7 CTG2171 SC fin 1,972 1 100 alignment length < 2000
   CT027552.11 DKEY-7C22 CTG2171 MINUS fin 2,000 0 100
CU062502.10 CH73-21G5 CTG2171 SC fin 2,000 0 100
CR847529.10 DKEY-1C11 CTG2171 SC fin 2,000 0 100
CR548634.10 CH211-145D10 CTG2171 SC fin 2,000 0 100
CU179748.5 CH73-160E9 CTG2171 SC fin 2,000 0 100
   BX005235.9 DKEY-68L7 CTG2171 MINUS fin 2,000 0 100
   BX005123.16 DKEY-1A7 CTG2171 MINUS fin 2,000 0 100
   AL772391.18 CH211-35J18 CTG2171 MINUS fin 2,000 0 100
CR354612.18 DKEY-155K21 CTG2171 SC fin 2,000 0 100
CT027629.6 DKEY-237G3 CTG2171 SC fin 2,000 0 100
CR388207.13 CH211-28E16 CTG2171 SC fin 2,000 0 100
CT573317.6 CH73-7K20 CTG2171 SC fin 2,000 0 100
   AL929188.6 CH211-273O6 CTG2171 MINUS fin 2,000 0 100
   AL954857.10 DKEY-216D12 CTG2171 MINUS fin 2,000 0 100
   AL928977.10 DKEY-24D19 CTG2171 MINUS fin 2,000 0 100
   AL845437.14 DKEY-98J1 CTG2171 MINUS fin 2,000 0 100
   CR751236.6 DKEY-27M6 CTG2171 MINUS fin 2,000 0 100
   CR339058.11 CH211-135H16 CTG2171 MINUS fin 2,000 0 100
CU459156.8 CH73-313G1 CTG2171 SC fin 1,995 6 98.396 identity < 99.6%; alignment length < 2000
BX539346.9 DKEYP-73G7 CTG2171 SC fin 2,000 3 99.200 identity < 99.6%
CU062415.7 CH73-233L1 CTG2171 SC fin 33,020 0 100
CR456641.8 DKEY-69N13 CTG2171 SC fin 2,000 0 100
CR450795.8 CH211-203J19 CTG2171 SC fin 2,000 0 100
CR925720.9 DKEY-196B15 CTG2171 SC fin 2,000 0 100
CR925709.5 DKEY-21O19 CTG2171 SC fin 829 2 98.794 half-dovetail of >0bp and <=50bp; identity < 99.6%; alignment length < 2000
   CABZ01009162.1 ? CTG2171 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01009161.1 ? CTG2171 MINUS wgs 6,545 3 99.710 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
FO704894.2 CH1073-390D16 CTG2171 SC pre 4,427 5 99.977 alignment exists; one or more unfinished sequences
   CABZ01009158.1 ? CTG2171 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01009157.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01074241.1 ? CTG2171 None wgs
   FO704613.2 CH1073-432F14 CTG2171 CONTAINED_TURNOUT in CABZ01074241.1 fin 19,056 7 99.932 contained sequence
CU207252.9 CH211-125C5 CTG2171 SC fin 2,000 0 100
BX957326.8 DKEY-31B16 CTG2171 SC fin 2,000 0 100
CT027653.5 DKEY-157K16 CTG2171 SC fin 2,000 1 100
CU041397.9 CH73-306C3 CTG2171 SC fin 2,000 0 100
CR376748.8 DKEY-7I1 CTG2171 SC fin 2,000 0 100
CR847803.7 DKEY-188C14 CTG2171 SC fin 2,000 0 100
CR847513.6 CH211-219M19 CTG2171 SC fin 2,000 0 100
   CR382340.7 DKEY-151G10 CTG2171 MINUS fin 2,000 0 100
CR457457.16 CH211-150A20 CTG2171 SC fin 2,000 0 100
CT573346.8 CH73-60E21 CTG2171 SC fin 2,000 0 100
BX957329.9 CH211-130P21 CTG2171 SC fin 2,000 0 100
BX005414.13 DKEY-21C19 CTG2171 SC fin 2,000 0 100
CR318614.7 DKEY-24L7 CTG2171 SC fin 2,000 0 100
CR678304.6 DKEY-254E8 CTG2171 SC fin 2,000 0 100
CR628368.8 DKEY-51B3 CTG2171 SC fin 2,000 0 100
   AL845287.10 DKEY-78K11 CTG2171 MINUS fin 1,979 10 98.231 identity < 99.6%; alignment length < 2000
BX927204.7 CH211-103B12 CTG2171 SC fin 999 2 98.999 identity < 99.6%; alignment length < 2000
   BX571776.5 CH211-139K15 CTG2171 MINUS fin 2,000 0 100
   CR339060.11 DKEY-276H21 CTG2171 MINUS fin 2,000 0 100
   CT573333.7 CH73-206D17 CTG2171 MINUS fin 2,000 0 100
CR936463.11 DKEY-205H13 CTG2171 SC fin 2,000 1 100
CR855310.9 CH211-134D5 CTG2171 SC fin 2,000 0 100
CR774183.10 CH211-190A18 CTG2171 SC fin 2,000 0 100
CT573349.6 CH73-355C8 CTG2171 SC fin 2,000 0 100
CU862020.7 CH73-339C6 CTG2171 SC fin 2,000 0 100
   CR354433.25 DKEY-157G16 CTG2171 MINUS fin 2,000 0 100
   CT573351.8 CH73-42A22 CTG2171 MINUS fin 2,000 0 100
   CR376824.10 DKEY-9P24 CTG2171 MINUS fin 2,001 0 100
   CR933816.6 CH73-136C12 CTG2171 MINUS fin 2,001 0 100
   CR354381.18 CH211-156J22 CTG2171 MINUS fin 2,000 0 100
   CR352210.11 DKEY-166N8 CTG2171 MINUS fin 2,000 0 100
   CT573331.8 CH73-367E20 CTG2171 MINUS fin 2,000 0 100
   CR387931.9 CH211-169D8 CTG2171 MINUS fin 100 0 99.000 identity < 99.6%; alignment length < 2000
BX539336.8 CH211-128H21 CTG2171 SC fin 2,000 0 100
BX470222.8 DKEYP-120F10 CTG2171 SC fin 1,998 1 100 alignment length < 2000
   CR354371.12 CH211-267G13 CTG2171 MINUS fin 100 0 98.000 identity < 99.6%; alignment length < 2000
   BX663515.13 DKEY-228G21 CTG2171 MINUS fin 2,000 0 100
   CU041401.4 DKEY-104L7 CTG2171 MINUS fin 2,000 0 100
   CT025585.5 DKEY-149I8 CTG2171 MINUS fin 2,000 0 100
   BX664745.13 DKEY-242A8 CTG2171 MINUS fin 2,000 0 100
   CR354431.11 DKEY-23G9 CTG2171 MINUS fin 2,000 0 100
   CR381533.5 CH211-237P19 CTG2171 MINUS fin 2,000 0 100
   CR677513.9 DKEY-203C4 CTG2171 MINUS fin 2,000 0 100
CR376756.10 CH211-87A15 CTG2171 SC fin 2,000 1 100
   CR677617.8 DKEY-246I21 CTG2171 MINUS fin 2,000 1 100
   CR356221.6 CH211-189F14 CTG2171 MINUS fin 2,000 0 100
   CT573387.5 CH73-351L22 CTG2171 MINUS fin 2,000 0 100
CR381616.9 CH211-129O18 CTG2171 SC fin 2,000 0 100
BX571850.7 DKEY-259L18 CTG2171 SC fin 2,000 0 100
CR391934.16 DKEY-279E7 CTG2171 SC fin 1,999 3 99.050 identity < 99.6%; alignment length < 2000
CT573456.9 CH211-190P6 CTG2171 SC fin 1,993 4 98.194 identity < 99.6%; alignment length < 2000
FP101914.4 CH1073-155H19 CTG2171 SC fin 2,000 0 100
   CU695073.6 CH73-236E11 CTG2171 MINUS fin 6,622 5 99.607 half-dovetail of >50bp
   CABZ01043983.1 ? CTG2171 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01043982.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01043981.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01079072.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01079071.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01079070.1 ? CTG2171 MINUS wgs 3,926 0 100
   FP236194.3 CH73-139B4 CTG2171 MINUS fin 2,000 0 100
   BX663608.26 DKEY-223I19 CTG2171 MINUS fin 2,000 0 100
CR293528.7 CH211-67F18 CTG2171 SC fin 2,000 0 99.900
CR753893.6 DKEYP-78A6 CTG2171 SC fin 2,000 1 100
CT573305.5 CH73-247D4 CTG2171 SC fin 2,000 0 100
CR456642.7 DKEY-104P11 CTG2171 SC fin 2,000 0 100
CU466286.6 CH73-298E8 CTG2171 SC fin 2,000 0 100
CU062483.7 CH73-287N15 CTG2171 SC fin 2,000 0 100
AL845357.6 DKEY-202M22 CTG2171 SC fin 2,000 0 100
BX649489.7 CH211-89O10 CTG2171 SC fin 2,000 1 100
BX649257.8 CH211-197L9 CTG2171 SC fin 2,000 0 100
CR759802.10 DKEY-261L7 CTG2171 SC fin 2,000 0 100
CR735144.8 DKEY-241O6 CTG2171 SC fin 2,001 0 100
CR759830.8 DKEYP-79F12 CTG2171 SC fin 2,000 0 100
CR318665.6 DKEY-190D14 CTG2171 SC fin 2,000 0 100
BX927365.7 DKEY-161P7 CTG2171 SC fin 2,000 0 100
CT573377.14 DKEY-172L11 CTG2171 SC fin 2,000 0 100
BX927210.9 DKEY-126G1 CTG2171 SC fin 2,000 0 100
CU469363.8 DKEY-197C14 CTG2171 SC fin 2,000 0 100
CU041363.4 CH73-286N19 CTG2171 SC fin 2,000 0 100
BX957355.14 CH211-66I15 CTG2171 SC fin 2,000 0 100
BX001041.7 CH211-62M7 CTG2171 SC fin 2,000 0 100
   BX927073.7 DKEYP-78C2 CTG2171 MINUS fin 55,726 6 100
CR678070.11 DKEY-261H17 CTG2171 SC fin 2,000 0 100
CR753882.4 DKEY-247P15 CTG2171 SC fin 2,000 0 100
BX470150.13 DKEY-164K14 CTG2171 SC fin 2,000 0 100
CR354557.9 DKEY-34I7 CTG2171 SC fin 2,000 0 100
CT573384.5 CH73-165H8 CTG2171 SC fin 2,000 0 100
   AL928610.8 CH211-245P6 CTG2171 MINUS fin 2,000 0 100
   AL929087.4 CH211-226M16 CTG2171 MINUS fin 1,975 0 100 half-dovetail of >0bp and <=50bp; alignment length < 2000
CR293512.7 DKEY-27M20 CTG2171 SC fin 1,996 1 100 alignment length < 2000
CR678488.7 DKEY-220D15 CTG2171 SC fin 2,000 0 100
CT027694.11 DKEY-32G6 CTG2171 SC fin 2,000 0 100
CR354384.8 DKEY-268P11 CTG2171 SC fin 2,000 1 100
CR354542.8 CH211-210C8 CTG2171 SC fin 2,000 0 100
CR381531.7 DKEY-190G6 CTG2171 SC fin 96,729 70 99.716 approved certificate; half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
CT025912.10 CH211-148L7 CTG2171 SC fin 2,000 0 100
   AL954678.8 CH211-207E14 CTG2171 MINUS fin 1,742 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
LO017710.2 CH73-279P16 CTG2171 SC pre 1,001 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
   CABZ01070875.1 ? CTG2171 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070874.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01087243.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01087244.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01087245.1 ? CTG2171 None wgs
   GAP TYPE-2 100 PAIRED ENDS
   BX649314.6 DKEYP-111A3 CTG2171 MINUS fin 18,957 70 98.391 half-dovetail of >50bp; >0 gap of 50bp or more, not simple sequence
CABZ01061580.1 ? CTG2171 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061581.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061582.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061583.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061584.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061585.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01061586.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062460.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062459.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062458.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062457.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062456.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062455.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062454.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062453.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062452.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062451.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062450.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062449.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062448.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062447.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062446.1 ? CTG2171 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01085385.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01085386.1 ? CTG2171
   GAP TYPE-2 100 PAIRED ENDS
CABZ01085387.1 ? CTG2171
GAP TYPE-3
CABZ01008175.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008176.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008177.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008178.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008179.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008180.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008181.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01008182.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
LO017646.1 CH1073-835H3 CTG2213 SC pre 16,656 2 100 alignment exists; one or more unfinished sequences
   CR352218.7 DKEYP-118G5 CTG2213 MINUS fin 2,000 0 100
   BX294434.12 CH211-236H17 CTG2213 MINUS fin 1,997 8 99.099 >0 gap of 25bp or more, not simple sequence; identity < 99.6%; alignment length < 2000
CU459147.9 CH211-32K20 CTG2213 SC fin 1,992 3 98.845 identity < 99.6%; alignment length < 2000
   CT955966.8 DKEY-118B20 CTG2213 MINUS fin 2,000 0 100
AL807818.14 CH211-225H24 CTG2213 SC fin 2,000 0 100
   CR933812.6 CH73-33I18 CTG2213 MINUS fin 2,000 0 100
CU694248.10 CH211-268M8 CTG2213 SC fin 2,584 0 100 alignment exists; one or more unfinished sequences
FO904851.2 CH1073-236K19 CTG2213 SC pre 8,785 0 100 alignment exists; one or more unfinished sequences
LO017884.1 CH1073-482B18 CTG2213 SC pre 6,971 0 99.986 alignment exists; one or more unfinished sequences
   BX465853.12 DKEY-18F23 CTG2213 MINUS fin 2,000 0 100
   BX546466.6 DKEY-43N10 CTG2213 MINUS fin 2,000 0 100
   BX465864.12 DKEY-148F24 CTG2213 MINUS fin 2,000 0 100
   BX005254.9 DKEY-81P22 CTG2213 MINUS fin 2,000 0 100
BX539344.4 DKEYP-15D4 CTG2213 SC fin 2,000 0 100
   BX571773.12 DKEY-174K1 CTG2213 MINUS fin 1,998 1 100 alignment length < 2000
CU468730.7 CH73-383O19 CTG2213 SC fin 28,673 2 100 alignment exists; one or more unfinished sequences
FO704757.3 CH211-279H10 CTG2213 SC pre 6,128 14 98.809 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
   BX321896.13 RP71-49B22 CTG2213 MINUS fin 100 0 100 alignment length < 2000
CU571398.7 DKEY-110M18 CTG2213 SC fin 2,000 0 100
   CR926464.12 DKEY-229P15 CTG2213 MINUS fin 13,920 3 100 alignment exists; one or more unfinished sequences
FO904854.2 CH1073-465D9 CTG2213 SC pre 12,072 25 99.760 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
CABZ01118914.1 ? CTG2213 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118915.1 ? CTG2213
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118916.1 ? CTG2213
GAP TYPE-3
CABZ01054876.1 ? CTG578
   GAP TYPE-2 100 PAIRED ENDS
CABZ01054877.1 ? CTG578
   GAP TYPE-2 100 PAIRED ENDS
CABZ01054878.1 ? CTG578 None wgs 12,212 3 99.943 alignment exists; one or more unfinished sequences
FO905005.1 CH73-387H24 CTG578 SC pre 16,303 2 100 alignment exists; one or more unfinished sequences
CR846089.12 DKEY-211F8 CTG578 SC fin 2,000 0 100
CR762383.11 DKEY-28M7 CTG578 SC fin 2,000 0 100
CR762407.8 DKEY-262N17 CTG578 SC fin 23,887 2 100
   AL954146.8 CH211-213I6 CTG578 MINUS fin 99 0 100 half-dovetail of >0bp and <=50bp; alignment length < 2000
BX677664.10 DKEYP-122B11 CTG578 SC fin 6,856 0 99.971 half-dovetail of >50bp
CABZ01072294.1 ? CTG578 None wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057013.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057012.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057011.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057010.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057009.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057008.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057007.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057006.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01057005.1 ? CTG578 MINUS wgs 5,247 5 99.809 alignment exists; one or more unfinished sequences
FO904852.1 CH1073-21H6 CTG578 SC pre 7,998 2 100 alignment exists; one or more unfinished sequences
   CR381544.22 CH211-231H20 CTG578 MINUS fin 2,000 0 100
AL929379.14 CH211-156H6 CTG578 SC fin 2,000 0 100
   CU682811.6 DKEY-222E15 CTG578 MINUS fin 15,979 1 99.994 half-dovetail of >0bp and <=50bp
   CABZ01070586.1 ? CTG578 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070585.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070584.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070583.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070582.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070581.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070580.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070579.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070578.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070577.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070576.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070575.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070574.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070573.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070572.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070571.1 ? CTG578 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01070570.1 ? CTG578 MINUS
GAP TYPE-3
FO904868.3 CH73-331H17 CTG2210 SC pre 2,190 0 100 alignment exists; one or more unfinished sequences
   CR381571.19 CH211-255P15 CTG2210 MINUS fin 738 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
FO904865.2 CH1073-252J5 CTG2210 SC pre 1,599 4 99.124 alignment exists; one or more unfinished sequences; identity < 99.6%; alignment length < 2000
   CABZ01034561.1 ? CTG2210 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034560.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034559.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034558.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034557.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034556.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034552.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034551.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034550.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034549.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034548.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034547.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034546.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034545.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034544.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034543.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034542.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034541.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034540.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034539.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034538.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034537.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034536.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034535.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034534.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034533.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01034532.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01112780.1 ? CTG2210
   GAP TYPE-2 100 PAIRED ENDS
CABZ01112781.1 ? CTG2210
   GAP TYPE-2 100 PAIRED ENDS
CABZ01112782.1 ? CTG2210
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083768.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083767.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083766.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083765.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083764.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083763.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083762.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083761.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083760.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083759.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083758.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083757.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083756.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083755.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01083754.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054033.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054032.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054031.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054030.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054029.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054028.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054027.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054026.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054025.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054024.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054023.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054022.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054021.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054020.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054019.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01054018.1 ? CTG2210 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01002528.1 ? CTG2210
   GAP TYPE-2 100 PAIRED ENDS
FO904988.3 CH73-290B11 CTG2210 SC pre 4,555 0 100 alignment exists; one or more unfinished sequences
   CU302205.9 DKEY-79L8 CTG2210 MINUS fin 2,000 0 100
   BX548066.3 CH211-226F1 CTG2210 MINUS fin 2,000 0 100
   BX649542.5 CH211-51H1 CTG2210 MINUS fin 2,000 0 100
BX255940.5 DKEY-3P8 CTG2210 SC fin 100 1 100 alignment length < 2000
CR450830.9 CH211-286F9 CTG2210 SC fin 2,000 0 100
CU657980.5 CH73-217B7 CTG2210 SC fin 19,871 1 100 alignment exists; one or more unfinished sequences
FO904886.1 CH73-324I4 CTG2210 SC pre
   GAP TYPE-2 100 PAIRED ENDS
   FQ790213.10 CH73-278B3 CTG2210 MINUS fin 2,000 0 100
   CU633968.5 CH1073-326E18 CTG2210 MINUS fin 2,000 0 100
   CU896628.5 ZFOS-1406D9 CTG2210 MINUS fin
GAP TYPE-3
   FO904878.2 CH1073-792K11 CTG6386 MINUS pre 8,977 0 100 alignment exists; one or more unfinished sequences
CU929340.4 CH1073-138D10 CTG6386 SC fin 7,077 0 99.972 half-dovetail of >0bp and <=50bp
   CABZ01017117.1 ? CTG6386 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01017116.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01017115.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01067004.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01067003.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01067002.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01067001.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01067000.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066999.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066998.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066997.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066996.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066995.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066994.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066993.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066992.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01066991.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01021670.1 ? CTG6386 None wgs 28,344 6 99.968 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
FO904883.2 CH1073-789G13 CTG6386 SC pre 18,988 1 100 alignment exists; one or more unfinished sequences
CR354556.11 DKEY-100J22 CTG6386 SC fin 2,000 0 100
CR381701.6 CH211-244H16 CTG6386 SC fin 2,000 0 100
CR405692.13 DKEYP-27C8 CTG6386 SC fin 2,000 0 100
   CU929289.7 DKEY-194E6 CTG6386 MINUS fin 10,645 4 99.981 alignment exists; one or more unfinished sequences
LO017845.2 CH73-369O18 CTG6386 SC pre 10,666 5 99.578 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
   CABZ01056847.1 ? CTG6386 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056846.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056845.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056844.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056843.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056842.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056841.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056840.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056839.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056838.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056837.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056836.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056835.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056834.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056833.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056832.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056831.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056830.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056829.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056828.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056827.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056826.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056825.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056824.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056823.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056822.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056821.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056820.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056819.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056818.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056817.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056816.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056815.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056814.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056813.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056812.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056811.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056810.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056809.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056808.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056807.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01056806.1 ? CTG6386 MINUS
   GAP TYPE-2 100 OPTICAL MAP
   CABZ01062562.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062561.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062560.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062559.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062558.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062557.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062556.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062555.1 ? CTG6386 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01062554.1 ? CTG6386 MINUS
   GAP TYPE-2 100 OPTICAL MAP
CABZ01109869.1 ? CTG6386
   GAP TYPE-2 100 OPTICAL MAP
CABZ01012557.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01012558.1 ? CTG6386 None wgs 12,262 0 100 half-dovetail of >0bp and <=50bp
CU855944.10 CH73-184C24 CTG6386 SC fin 2,000 0 100
CU914487.7 CH73-189P6 CTG6386 SC fin 77,118 4 100
CT025860.7 CH73-302A13 CTG6386 SC fin 2,000 0 100
AL928887.15 CH211-136O14 CTG6386 SC fin 1,994 3 100 alignment length < 2000
   CU855854.8 CH73-116B16 CTG6386 MINUS fin 50 0 100 alignment exists; one or more unfinished sequences; alignment length < 2000
LO017844.1 CH1073-396D22 CTG6386 SC pre 859 0 100 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
CABZ01049763.1 ? CTG6386 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049764.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049765.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049766.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049767.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049768.1 ? CTG6386 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049769.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049770.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049771.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049772.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049773.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
CABZ01049774.1 ? CTG6386
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01093041.1 ? CTG6386 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
CU929442.8 ZFOS-470C8 CTG6386 SC fin 2,000 0 100
CU929398.4 CH1073-114F3 CTG6386 SC fin 20,464 8 99.985 half-dovetail of >50bp
   CABZ01093037.1 ? CTG6386 MINUS wgs
GAP TYPE-3
CABZ01065130.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01065131.1 ? CTG2458 None wgs 15,242 3 99.921 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
   FO904960.1 CH1073-390P18 CTG2458 MINUS pre 11,639 0 100 alignment exists; one or more unfinished sequences
FP015919.8 CH73-73D17 CTG2458 SC fin 1,996 1 100 alignment length < 2000
CU013526.13 DKEY-12M15 CTG2458 SC fin 2,000 0 100
CT997819.10 CH211-121B5 CTG2458 SC fin 18,833 14 99.926 half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
CABZ01065156.1 ? CTG2458 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01065157.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
FO904880.2 CH1073-251J1 CTG2458 SC pre 3,471 2 100 alignment exists; one or more unfinished sequences
CU929190.6 CH73-217N20 CTG2458 SC fin 2,000 0 100
CU929181.6 CH1073-38K5 CTG2458 SC fin 2,000 0 100
CU914614.5 CH1073-287N7 CTG2458 SC fin
   GAP TYPE-2 100 PAIRED ENDS
CABZ01065178.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01066224.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01066225.1 ? CTG2458 None wgs 3,982 21 98.795 identity < 99.6%
   BX004770.12 DKEY-14K21 CTG2458 MINUS fin 2,000 0 100
BX005287.9 DKEY-65J6 CTG2458 SC fin 2,000 0 98.650 identity < 99.6%
   CR545469.17 DKEY-151K14 CTG2458 MINUS fin 2,000 0 100
BX322612.8 RP71-80O10 CTG2458 SC fin 1,155 1 99.913 half-dovetail of >50bp
   CABZ01003791.1 ? CTG2458 MINUS wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117590.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117591.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117592.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117593.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117594.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117595.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117596.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117597.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117598.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117599.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117600.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117601.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117602.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117603.1 ? CTG2458
   GAP TYPE-2 100 PAIRED ENDS
CABZ01117604.1 ? CTG2458 None wgs 28,999 15 100 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
FO704916.1 CH1073-283D23 CTG2458 SC pre 1,214 1 100 alignment exists; one or more unfinished sequences; alignment length < 2000
CABZ01117605.1 ? CTG2458 None wgs
GAP TYPE-3
CABZ01058305.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01058306.1 ? CTG6427 None wgs
   GAP TYPE-2 100 PAIRED ENDS
   FO704781.1 ZFOS-827H5 CTG6427 MINUS pre 25,065 171 97.483 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence; identity < 98%
   CU681840.13 CH73-285P12 CTG6427 MINUS fin 2,000 0 100
CR318612.25 CH211-149B19 CTG6427 SC fin 2,000 0 100
   CU682347.6 CH1073-448C23 CTG6427 MINUS fin 1,924 1 100 alignment length < 2000
   CU993818.4 CH1073-468O21 CTG6427 MINUS fin 2,000 0 100
CU151891.3 CH1073-76A20 CTG6427 SC fin 13,873 10 99.668 alignment exists; one or more unfinished sequences
FO904943.1 CH1073-61K13 CTG6427 SC pre 26,911 6 99.981 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 50bp or more, not simple sequence
CABZ01071876.1 ? CTG6427 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01071875.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01071874.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01071873.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01071872.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072557.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072558.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072559.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072560.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072561.1 ? CTG6427
   GAP TYPE-2 100 OPTICAL MAP
CABZ01072562.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01072563.1 ? CTG6427 None wgs 23,791 3 99.933 alignment exists; one or more unfinished sequences; half-dovetail of >50bp
FO818737.2 ZFOS-407D8 CTG6427 SC pre 11,266 39 99.547 alignment exists; one or more unfinished sequences; more than one overlap present
CABZ01072564.1 ? CTG6427 None wgs
   GAP TYPE-2 100 OPTICAL MAP
   CABZ01115319.1 ? CTG6427 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01115318.1 ? CTG6427 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01115317.1 ? CTG6427 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01115316.1 ? CTG6427 MINUS wgs 31,253 5 99.939 half-dovetail of >0bp and <=50bp
   CU855943.16 CH73-106G13 CTG6427 MINUS fin 2,000 0 100
   CU856236.6 CH1073-157B13 CTG6427 MINUS fin
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01072661.1 ? CTG6427 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081649.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081650.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081651.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01081652.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118699.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118700.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118701.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118702.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118703.1 ? CTG6427 None wgs 6,399 2 99.969 alignment exists; one or more unfinished sequences
FO904964.2 CH1073-873G21 CTG6427 SC pre 9,318 0 100 alignment exists; one or more unfinished sequences
CU694439.8 ZFOS-524D12 CTG6427 SC fin 17,147 2 99.953 alignment exists; one or more unfinished sequences
FO904893.2 CH1073-301G7 CTG6427 SC pre 21,229 1 100 alignment exists; one or more unfinished sequences
CABZ01118710.1 ? CTG6427 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01118711.1 ? CTG6427
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01078481.1 ? CTG6427 MINUS wgs 5,854 1 100
CU633916.5 CH1073-228J22 CTG6427 SC fin 2,000 0 100
   CU896563.7 CH73-375G18 CTG6427 MINUS fin 2,000 0 100
   CU929143.18 CH73-160P18 CTG6427 MINUS fin 2,000 0 100
   CU633889.5 CH1073-89L17 CTG6427 MINUS fin 2,000 0 100
   CU683899.9 CH73-265D7 CTG6427 MINUS fin 2,000 1 100
CU633932.5 CH1073-98B4 CTG6427 SC fin 25,064 5 99.980 alignment exists; one or more unfinished sequences
LO017863.1 CH1073-792N15 CTG6427 SC pre 9,010 3 99.645 alignment exists; one or more unfinished sequences; half-dovetail of >50bp; >0 gap of 500bp or more, not simple sequence
   CABZ01019641.1 ? CTG6427 MINUS wgs
GAP TYPE-3
   CABZ01069179.1 ? CTG2229 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01069178.1 ? CTG2229 MINUS wgs 25,101 12 99.940 >0 gap of 50bp or more, not simple sequence
   CU633888.6 CH1073-17J8 CTG2229 MINUS fin 2,000 0 100
   CU682777.6 CH73-269M23 CTG2229 MINUS fin 2,000 0 100
   CU682622.9 CH73-361H17 CTG2229 MINUS fin 25,846 0 100
   CU682346.7 CH1073-441P17 CTG2229 MINUS fin 2,000 0 100
FP074870.3 CH1073-393H22 CTG2229 SC fin 2,000 0 100
   FP236606.5 CH1073-208H10 CTG2229 MINUS fin 10,009 6 99.970
CABZ01050464.1 ? CTG2229 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050465.1 ? CTG2229 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01103925.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01103926.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050466.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050467.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CU682362.8 CH73-321M12 CTG2229 SC fin 8,887 0 100 half-dovetail of >50bp
CABZ01050476.1 ? CTG2229 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050477.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
   CU929452.7 CH73-168D20 CTG2229 MINUS fin 2,000 0 100
   CU682355.17 CH73-17A11 CTG2229 MINUS fin 10,946 3 99.927 half-dovetail of >50bp
CABZ01050490.1 ? CTG2229 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050491.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01050492.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073261.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073262.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073263.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073264.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073265.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073266.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073267.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073268.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01073269.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CU905501.8 CH211-116M6 CTG2229 SC fin
   GAP TYPE-2 100 PAIRED ENDS
CABZ01076995.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01076996.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01076997.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01076998.1 ? CTG2229
   GAP TYPE-2 100 PAIRED ENDS
CABZ01076999.1 ? CTG2229
GAP TYPE-3
CU672235.14 ZFOS-90C9 CTG10161 SC fin 2,000 0 100
   CU694268.16 CH1073-95O12 CTG10161 MINUS fin
GAP TYPE-3
CABZ01067136.1 ? CTG10356 None wgs 868 0 100 alignment length < 2000
CU855773.6 CH1073-512G5 CTG10356 SC fin 2,000 0 100
CU681841.19 CH73-290K24 CTG10356 SC fin 11,739 0 100
CABZ01084914.1 ? CTG10356 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084915.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084916.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084917.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084918.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084919.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01084920.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
CABZ01067148.1 ? CTG10356
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074744.1 ? CTG10356 MINUS
   GAP TYPE-2 100 PAIRED ENDS
CU656041.10 ZFOS-656F9 CTG10356 SC fin 17,755 6 99.854 alignment exists; one or more unfinished sequences
LO018477.1 CH1073-652E20 CTG10356 SC pre
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01074742.1 ? CTG10356 MINUS wgs
GAP TYPE-3
CABZ01088024.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088025.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088026.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088027.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088028.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088029.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088030.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088031.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088032.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088033.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088034.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088035.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01088036.1 ? CTG10219
   GAP TYPE-2 100 OPTICAL MAP
CABZ01099379.1 ? CTG10219
   GAP TYPE-2 100 OPTICAL MAP
   CABZ01085693.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01085692.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01085691.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01085690.1 ? CTG10219 MINUS wgs 2,678 1 99.701 half-dovetail of >0bp and <=50bp
CU984603.23 CH73-67C22 CTG10219 SC fin 73,844 37 99.844 alignment exists; one or more unfinished sequences; >0 gap of 50bp or more, not simple sequence
LO017850.1 CH73-148E16 CTG10219 SC pre 5,626 2 99.698 alignment exists; one or more unfinished sequences; >0 gap of 500bp or more, not simple sequence
CABZ01069336.1 ? CTG10219 None wgs
   GAP TYPE-2 100 PAIRED ENDS
CABZ01069337.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01069338.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01069339.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
CABZ01069340.1 ? CTG10219
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080919.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080918.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080917.1 ? CTG10219 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01080916.1 ? CTG10219 MINUS
GAP TYPE-3
   CABZ01071906.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071905.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071904.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071903.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071902.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071901.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071900.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071899.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071898.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071897.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01071896.1 ? CTG10178 MINUS wgs 3,353 0 99.732
   CU914158.14 ZFOS-955E8 CTG10178 MINUS fin 3,728 0 100 alignment exists; one or more unfinished sequences
FO834817.2 CH1073-655O12 CTG10178 SC pre
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01102529.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01102528.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01102527.1 ? CTG10178 MINUS
   GAP TYPE-2 100 PAIRED ENDS
   CABZ01101410.1 ? CTG10178 MINUS