GTR Test Accession:
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GTR000591173.1
Last updated in GTR: 2020-07-01
View version history
GTR000591173.1, last updated: 2020-07-01
Last annual review date for the lab: 2023-06-14
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At a Glance
Test purpose:
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Diagnosis;
Screening
Conditions (6):
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Lynch syndrome; Carcinoma of colon; Familial adenomatous polyposis 1; ...
Enzymes (1):
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Mismatch repair endonuclease PMS2
Proteins (3):
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DNA mismatch repair protein Mlh1; DNA mismatch repair protein Msh2; DNA mismatch repair protein Msh6
Methods (1):
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Biochemical Genetics - Immunohistochemistry: Antibody detection
Target population: Help
patients who show symptoms of lynch syndrome/HPNCC
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Test short name:
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MMR IHC
Specimen Source:
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- Fresh tissue
- Frozen tissue
- Paraffin block
- View specimen requirements
Who can order: Help
- Health Care Provider
- Licensed Physician
Test Order Code:
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IHC for MLH1, MSH2, MSH6, PMS2
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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use the IHC requisition form and select the proteins you want stained by IHC
CPT codes are 88342 x1, and 88341 x3
Order URL
CPT codes are 88342 x1, and 88341 x3
Order URL
Test service:
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Immunohistochemistry
OrderCode: 88342x1, 88341x3
OrderCode: 88342x1, 88341x3
Informed consent required:
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No
Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Lab contact for this test,
Test strategy,
Test development
Conditions
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Total conditions: 6
Condition/Phenotype | Identifier |
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Test Targets
Enzymes
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Total enzymes: 1
Enzyme | Associated Condition |
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Proteins
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Total proteins: 3
Protein | Associated Condition |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument
Immunohistochemistry
Antibody detection
LABVISION 360 AUTOSTAINER
Clinical Information
Test purpose:
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Diagnosis;
Screening
Target population:
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patients who show symptoms of lynch syndrome/HPNCC
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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N/A
N/A
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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No.
No.
Will the lab re-contact the ordering physician if variant interpretation changes?
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Not provided. our GeneticsNow service covers it all - please use our website www.gopathlabs.com
Not provided. our GeneticsNow service covers it all - please use our website www.gopathlabs.com
Recommended fields not provided:
Clinical validity,
Clinical utility,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Platform:
None/not applicable
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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control slides are used with each stain procedure. based on if the control is valid or not, the test performed for the batch of slides are valid or invalid. when the control is valid, accuracy and precision is 100%.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
CAP
VUS:
Software used to interpret novel variations
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N/A
Laboratory's policy on reporting novel variations Help
formal reports
N/A
Laboratory's policy on reporting novel variations Help
formal reports
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Suggested reading:
Clinical resources:
Practice guidelines:
Consumer resources:
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Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.