GTR Test Accession:
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GTR000613103.2
Last updated in GTR:
2024-05-10
View version history
GTR000613103.2,
last updated:
2024-05-10
GTR000613103.1,
registered in GTR:
2023-11-09
Last annual review date for the lab: 2024-05-28
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At a Glance
Test purpose:
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Diagnosis
Conditions (1):
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Cutaneous porphyria
Analytes (1):
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uroporphyrinogen III synthase
Methods (1):
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Biochemical Genetics - Analyte: High-performance liquid chromatography (HPLC)
Target population: Help
Diagnosis of congenital erythropoietic porphyria. This test is not useful …
Clinical validity:
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Not provided
Clinical utility:
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Establish or confirm diagnosis
Ordering Information
Offered by:
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Test short name:
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UPGC
Specimen Source:
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- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Dentist
- Licensed Physician
- Nurse Practitioner
- Physician Assistant
- Public Health Mandate
- Registered Nurse
Test Order Code:
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LOINC codes:
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Lab contact:
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Gisele (Gessi) Bentz Pino, MS, CGC, Certified Genetic counselor, CGC, Genetic Counselor
biochemicalgenetics@mayo.edu
1-800-533-1710
biochemicalgenetics@mayo.edu
1-800-533-1710
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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https://www.mayocliniclabs.com/test-catalog/overview/80288#Specimen
Order URL
Order URL
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Based on applicable state law
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Analytes
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Total analytes: 1
Analyte | Associated Condition |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Analyte
High-performance liquid chromatography (HPLC)
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis
Clinical utility:
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Establish or confirm diagnosis
View citations (1)
- Tortorelli S, Kloke K, Raymond K: Disorders of porphyrin metabolism. In: Dietzen DJ, Bennett MJ, Wong EDD, eds. Biochemical and Molecular Basis of Pediatric Disease. 4th ed. AACC Press; 2010:307-324
Target population:
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Diagnosis of congenital erythropoietic porphyria.
This test is not useful for diagnosis of acute intermittent porphyria (AIP).
View citations (4)
- Erwin AL, Desnick RJ. Congenital erythropoietic porphyria: Recent advances. Mol Genet Metab. 2019;128(3):288-297. doi:10.1016/j.ymgme.2018.12.008. Epub 2018 Dec 27. PMID: 30685241.
- Formate assay in body fluids: application in methanol poisoning. Makar AB, et al. Biochem Med. 1975;13(2):117-26. doi:10.1016/0006-2944(75)90147-7. PMID: 1. Tortorelli S, Kloke K, Raymond K: Disorders of porphyrin metabolism. In: Dietzen DJ, Bennett MJ, Wong EDD, eds. Biochemical and Molecular Basis of Pediatric Disease. 4th ed. AACC Press; 2010:307-324.
- Delineation of the intimate details of the backbone conformation of pyridine nucleotide coenzymes in aqueous solution. Bose KS, et al. Biochem Biophys Res Commun. 1975;66(4):1173-9. doi:10.1016/0006-291x(75)90482-9. PMID: 2. Nuttall KL, Klee GG: Analytes of hemoglobin metabolism-porphyrins, iron, and bilirubin. In: Burtis CA, Ashwood ER, eds. Tietz Textbook of Clinical Chemistry. 5th ed. WB Saunders Company; 2001:584-607.
- Metal substitutions incarbonic anhydrase: a halide ion probe study. Smith RJ, et al. Biochem Biophys Res Commun. 1975;66(4):1281-6. doi:10.1016/0006-291x(75)90498-2. PMID: 3. Anderson KE, Sassa S, Bishop DF, Desnick RJ: Disorders of heme biosynthesis: X-Linked sideroblastic anemia and the porphyrias. In: Valle DL, Antonarakis S, Ballabio A, Beaudet AL, Mitchell GA, eds. The Online Metabolic and Molecular Bases of Inherited Disease. McGraw-Hill; 2019. Accessed May 6, 2022. Available at https://ommbid.mhmedical.com/content.aspx?sectionid=225540906&bookid=2709.
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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N/A
N/A
Will the lab re-contact the ordering physician if variant interpretation changes?
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Not provided. N/A
Not provided. N/A
Research:
Is research allowed on the sample after clinical testing is complete?
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N/A
N/A
Recommended fields not provided:
Clinical validity,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Sample negative report,
Sample positive report
Technical Information
Test Procedure:
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Washed cells are incubated with aminolevulinic acid as substrate and the series I and III porphyrin isomers formed are measured. The proportion of series III isomers formed in relation to total porphyrins (I + III isomers) represents the uroporphyrinogen III synthase activity. The values are reported as Relative Units.(Unpublished Mayo …
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Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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Accuracy was assessed by analysis of normal and abnormal specimens; all samples were clinically concordant. Intra assay precision was performed at 3 levels: CV results ranged from 0.6% to 2.3% (N=3 each). Inter assay precision was performed at 3 levels: CV results ranged from 1.1% to 4.7% (N=3 each). The …
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Assay limitations:
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This test is not useful for ruling out acute intermittent porphyria (AIP), a disorder caused by decreased uroporphyrinogen I synthase (also known as porphobilinogen deaminase). For AIP, order PBGD_ / Porphobilinogen Deaminase, Whole Blood. This test does not reliably distinguish between individuals who are carriers for congenital erythropoietic porphyria (CEP) …
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Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Intra-Laboratory
Description of PT method: Help
Intra-laboratory alternative assessment of performance through quality control or patient blind testing.
Description of internal test validation method: Help
This test was laboratory developed, and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements.
Yes
Method used for proficiency testing: Help
Intra-Laboratory
Description of PT method: Help
Intra-laboratory alternative assessment of performance through quality control or patient blind testing.
Description of internal test validation method: Help
This test was laboratory developed, and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements.
VUS:
Software used to interpret novel variations
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N/A
Laboratory's policy on reporting novel variations Help
N/A
N/A
Laboratory's policy on reporting novel variations Help
N/A
Recommended fields not provided:
Test Confirmation,
Citations to support assay limitations,
Citations to support internal test validation method,
Citations for Analytical validity,
PT Provider,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
Additional Information
Clinical resources:
Molecular resources:
Practice guidelines:
IMPORTANT NOTE:
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Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.