Entry - *300708 - CYCLIN Q; CCNQ - OMIM
* 300708

CYCLIN Q; CCNQ


Alternative titles; symbols

FAMILY WITH SEQUENCE SIMILARITY 58, MEMBER A; FAM58A


HGNC Approved Gene Symbol: CCNQ

Cytogenetic location: Xq28     Genomic coordinates (GRCh38): X:153,587,925-153,599,139 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq28 STAR syndrome 300707 XLD 3

TEXT

Cloning and Expression

Unger et al. (2008) identified the FAM58A gene in an analysis of genomic deletions in individuals with a constellation of facial dysmorphism and malformations designated STAR syndrome (300707). The 642-bp coding region encodes a protein of 214 amino acids. Using EST data, the authors found expression of the FAM58A gene in 27 of 48 adult tissues including kidney, colon, cervix, and uterus, but not heart. Genes homologous to FAM58A were found on the X chromosome in chimpanzee and dog; in mouse and rat, no true homologs were found. FAM58A contains a cyclin box-fold domain, a protein-binding domain found in cyclins with a role in cell cycle and transcription control. Coimmunoprecipitation assays demonstrated that FAM58A interacts with SALL1 (602218) but not SALL4 (607343), suggesting that FAM58A and SALL1 participate in the same developmental pathway. Knockdown of FAM58A mRNA by RNA interference (RNAi) in HEK293 cells resulted in a significant reduction of both FAM58A mRNA expression and proliferation of transfected cells.


Gene Structure

Unger et al. (2008) determined that the FAM58A gene has 5 coding exons.


Mapping

FAM58A is located approximately 0.56 Mb centromeric to MECP2 (300005) on chromosome Xq28 (Unger et al., 2008).


Molecular Genetics

In 2 females with anogenital and renal malformations, dysmorphic facial features, normal intelligence, and syndactyly of toes (STAR; 300707), Unger et al. (2008) detected heterozygous genomic deletions removing regions of the FAM58A gene (300708.0001-300708.0002). In 4 additional affected females, including the mother-daughter pair reported by Green et al. (1996), the authors identified heterozygous point mutations in FAM58A (300708.0003-300708.0005).

In a 19-year-old woman with STAR syndrome, Lefroy et al. (2017) identified a heterozygous deletion of the FAM58A gene. Her mother, who had only bilateral 4-5 toe syndactyly, was found to have approximately 50% mosaicism for the same deletion.


ALLELIC VARIANTS ( 5 Selected Examples):

.0001 STAR SYNDROME

CCNQ, 40-KB DEL
   RCV000011417

In a girl (case 1) with STAR syndrome (STAR; 300707) and additional features of lower lid coloboma, epilepsy, and syringomyelia, Unger et al. (2008) identified a de novo heterozygous deletion on chromosome Xq28 of approximately 40 kb (g.152,514,164_152,554,231del, NCBI36) that removed exons 1 and 2 as well as intron 1, a portion of intron 2, and the 5-prime untranslated region of the FAM58A gene.


.0002 STAR SYNDROME

CCNQ, 4249-BP DEL
   RCV000011418

In a girl (case 3) with STAR syndrome (STAR; 300707), Unger et al. (2008) detected a de novo heterozygous deletion of 4,249 bp (g.152,504,123_152,508,371del, NCBI36), which removed 1,265 bp of intron 4, all of exon 5 including the 3-prime untranslated region of the FAM58A gene, and 2,454 bp of 3-prime sequence.


.0003 STAR SYNDROME

CCNQ, IVS4DS, G-A, +1
  
RCV000011419

In a girl (case 2) with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous donor splice site mutation (c.555+1G-A) in intron 4 of the FAM58A gene.


.0004 STAR SYNDROME

CCNQ, 1-BP DUP, 201T
  
RCV000011420

In a girl (case 4) with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous 1-bp duplication (c.201dupT) in the FAM58A gene, resulting in a frameshift and a premature stop codon (Asn68TerfsTer1).


.0005 STAR SYNDROME

CCNQ, IVS4AS, G-A, -1
  
RCV000011421

In the mother and daughter (cases 5 and 6), previously reported by Green et al. (1996), with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous c.555-1G-A mutation in the FAM58A gene, which altered the splice acceptor site of intron 4.


REFERENCES

  1. Green, A. J., Sandford, R. N., Davison, B. C. C. An autosomal dominant syndrome of renal and anogenital malformations with syndactyly. J. Med. Genet. 33: 594-596, 1996. [PubMed: 8818947, related citations] [Full Text]

  2. Lefroy, H., Hurst, J. A., Shears, D. J. STAR syndrome: a further case and the first report of maternal mosaicism. Clin. Dysmorph. 26: 157-160, 2017. [PubMed: 28225384, related citations] [Full Text]

  3. Unger, S., Bohm, D., Kaiser, F. J., Kaulfuss, S., Borozdin, W., Buiting, K., Burfeind, P., Bohm, J., Barrionuevo, F., Craig, A., Borowski, K., Keppler-Noreuil, K., and 9 others. Mutations in the cyclin family member FAM58A cause an X-linked dominant disorder characterized by syndactyly, telecanthus and anogenital and renal malformations. Nature Genet. 40: 287-289, 2008. [PubMed: 18297069, related citations] [Full Text]


Contributors:
D. Isum Ward - updated : 11/03/2017
Creation Date:
Victor A. McKusick : 4/18/2008
carol : 09/11/2023
carol : 09/11/2023
carol : 11/03/2017
carol : 05/01/2017
alopez : 04/18/2008

* 300708

CYCLIN Q; CCNQ


Alternative titles; symbols

FAMILY WITH SEQUENCE SIMILARITY 58, MEMBER A; FAM58A


HGNC Approved Gene Symbol: CCNQ

SNOMEDCT: 723581006;  


Cytogenetic location: Xq28     Genomic coordinates (GRCh38): X:153,587,925-153,599,139 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq28 STAR syndrome 300707 X-linked dominant 3

TEXT

Cloning and Expression

Unger et al. (2008) identified the FAM58A gene in an analysis of genomic deletions in individuals with a constellation of facial dysmorphism and malformations designated STAR syndrome (300707). The 642-bp coding region encodes a protein of 214 amino acids. Using EST data, the authors found expression of the FAM58A gene in 27 of 48 adult tissues including kidney, colon, cervix, and uterus, but not heart. Genes homologous to FAM58A were found on the X chromosome in chimpanzee and dog; in mouse and rat, no true homologs were found. FAM58A contains a cyclin box-fold domain, a protein-binding domain found in cyclins with a role in cell cycle and transcription control. Coimmunoprecipitation assays demonstrated that FAM58A interacts with SALL1 (602218) but not SALL4 (607343), suggesting that FAM58A and SALL1 participate in the same developmental pathway. Knockdown of FAM58A mRNA by RNA interference (RNAi) in HEK293 cells resulted in a significant reduction of both FAM58A mRNA expression and proliferation of transfected cells.


Gene Structure

Unger et al. (2008) determined that the FAM58A gene has 5 coding exons.


Mapping

FAM58A is located approximately 0.56 Mb centromeric to MECP2 (300005) on chromosome Xq28 (Unger et al., 2008).


Molecular Genetics

In 2 females with anogenital and renal malformations, dysmorphic facial features, normal intelligence, and syndactyly of toes (STAR; 300707), Unger et al. (2008) detected heterozygous genomic deletions removing regions of the FAM58A gene (300708.0001-300708.0002). In 4 additional affected females, including the mother-daughter pair reported by Green et al. (1996), the authors identified heterozygous point mutations in FAM58A (300708.0003-300708.0005).

In a 19-year-old woman with STAR syndrome, Lefroy et al. (2017) identified a heterozygous deletion of the FAM58A gene. Her mother, who had only bilateral 4-5 toe syndactyly, was found to have approximately 50% mosaicism for the same deletion.


ALLELIC VARIANTS 5 Selected Examples):

.0001   STAR SYNDROME

CCNQ, 40-KB DEL
ClinVar: RCV000011417

In a girl (case 1) with STAR syndrome (STAR; 300707) and additional features of lower lid coloboma, epilepsy, and syringomyelia, Unger et al. (2008) identified a de novo heterozygous deletion on chromosome Xq28 of approximately 40 kb (g.152,514,164_152,554,231del, NCBI36) that removed exons 1 and 2 as well as intron 1, a portion of intron 2, and the 5-prime untranslated region of the FAM58A gene.


.0002   STAR SYNDROME

CCNQ, 4249-BP DEL
ClinVar: RCV000011418

In a girl (case 3) with STAR syndrome (STAR; 300707), Unger et al. (2008) detected a de novo heterozygous deletion of 4,249 bp (g.152,504,123_152,508,371del, NCBI36), which removed 1,265 bp of intron 4, all of exon 5 including the 3-prime untranslated region of the FAM58A gene, and 2,454 bp of 3-prime sequence.


.0003   STAR SYNDROME

CCNQ, IVS4DS, G-A, +1
SNP: rs1569536789, ClinVar: RCV000011419

In a girl (case 2) with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous donor splice site mutation (c.555+1G-A) in intron 4 of the FAM58A gene.


.0004   STAR SYNDROME

CCNQ, 1-BP DUP, 201T
SNP: rs1569536891, ClinVar: RCV000011420

In a girl (case 4) with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous 1-bp duplication (c.201dupT) in the FAM58A gene, resulting in a frameshift and a premature stop codon (Asn68TerfsTer1).


.0005   STAR SYNDROME

CCNQ, IVS4AS, G-A, -1
SNP: rs63749972, ClinVar: RCV000011421

In the mother and daughter (cases 5 and 6), previously reported by Green et al. (1996), with STAR syndrome (STAR; 300707), Unger et al. (2008) identified a heterozygous c.555-1G-A mutation in the FAM58A gene, which altered the splice acceptor site of intron 4.


REFERENCES

  1. Green, A. J., Sandford, R. N., Davison, B. C. C. An autosomal dominant syndrome of renal and anogenital malformations with syndactyly. J. Med. Genet. 33: 594-596, 1996. [PubMed: 8818947] [Full Text: https://doi.org/10.1136/jmg.33.7.594]

  2. Lefroy, H., Hurst, J. A., Shears, D. J. STAR syndrome: a further case and the first report of maternal mosaicism. Clin. Dysmorph. 26: 157-160, 2017. [PubMed: 28225384] [Full Text: https://doi.org/10.1097/MCD.0000000000000176]

  3. Unger, S., Bohm, D., Kaiser, F. J., Kaulfuss, S., Borozdin, W., Buiting, K., Burfeind, P., Bohm, J., Barrionuevo, F., Craig, A., Borowski, K., Keppler-Noreuil, K., and 9 others. Mutations in the cyclin family member FAM58A cause an X-linked dominant disorder characterized by syndactyly, telecanthus and anogenital and renal malformations. Nature Genet. 40: 287-289, 2008. [PubMed: 18297069] [Full Text: https://doi.org/10.1038/ng.86]


Contributors:
D. Isum Ward - updated : 11/03/2017

Creation Date:
Victor A. McKusick : 4/18/2008

Edit History:
carol : 09/11/2023
carol : 09/11/2023
carol : 11/03/2017
carol : 05/01/2017
alopez : 04/18/2008