Entry - #614153 - SPINOCEREBELLAR ATAXIA 36; SCA36 - OMIM
# 614153

SPINOCEREBELLAR ATAXIA 36; SCA36


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20p13 Spinocerebellar ataxia 36 614153 AD 3 NOP56 614154
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
HEAD & NECK
Ears
- Hearing loss, progressive (in some patients)
Eyes
- Impaired smooth pursuit
- Slow saccades
- Horizontal gaze nystagmus
- Gaze limitation
Mouth
- Tongue atrophy
- Tongue fasciculations
MUSCLE, SOFT TISSUES
- Distal skeletal muscle atrophy (after long disease duration)
- Chronic denervation seen on skeletal muscle biopsy
NEUROLOGIC
Central Nervous System
- Cerebellar ataxia
- Gait ataxia
- Limb ataxia
- Truncal instability
- Dysarthria
- Limb incoordination
- Fasciculations (after long disease duration)
- Hyperreflexia
- Extensor plantar responses
- Lower motor neuron involvement after long disease duration
- Cerebellar atrophy
- Loss of Purkinje cells
MISCELLANEOUS
- Mean age at onset of cerebellar ataxia is 52.8 years
- Progressive disorder
- Patients with longer disease duration show motor neuron involvement
- Described in families from western Japan
- Described in families from Galicia, Spain
- Unaffected individuals carry 3 to 14 repeats, whereas affected individuals carry 650 to 2,500 repeats
MOLECULAR BASIS
- Caused by hexanucleotide repeat expansion (GGCCTG)n in the homolog of the S. cerevisiae NOP56 gene (NOP56, 614154.0001)
Spinocerebellar ataxia - PS164400 - 48 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.33 Spinocerebellar ataxia 21 AD 3 607454 TMEM240 616101
1p35.2 Spinocerebellar ataxia 47 AD 3 617931 PUM1 607204
1p32.2-p32.1 Spinocerebellar ataxia 37 AD 3 615945 DAB1 603448
1p13.2 Spinocerebellar ataxia 19 AD 3 607346 KCND3 605411
2p16.1 Spinocerebellar ataxia 25 AD 3 608703 PNPT1 610316
3p26.1 Spinocerebellar ataxia 15 AD 3 606658 ITPR1 147265
3p26.1 Spinocerebellar ataxia 29, congenital nonprogressive AD 3 117360 ITPR1 147265
3p14.1 Spinocerebellar ataxia 7 AD 3 164500 ATXN7 607640
3q25.2 ?Spinocerebellar ataxia 43 AD 3 617018 MME 120520
4q27 ?Spinocerebellar ataxia 41 AD 3 616410 TRPC3 602345
4q34.3-q35.1 ?Spinocerebellar ataxia 30 AD 2 613371 SCA30 613371
5q32 Spinocerebellar ataxia 12 AD 3 604326 PPP2R2B 604325
5q33.1 Spinocerebellar ataxia 45 AD 3 617769 FAT2 604269
6p22.3 Spinocerebellar ataxia 1 AD 3 164400 ATXN1 601556
6p12.1 Spinocerebellar ataxia 38 AD 3 615957 ELOVL5 611805
6q14.1 Spinocerebellar ataxia 34 AD 3 133190 ELOVL4 605512
6q24.3 Spinocerebellar ataxia 44 AD 3 617691 GRM1 604473
6q27 Spinocerebellar ataxia 17 AD 3 607136 TBP 600075
7q21.2 Spinocerebellar ataxia 49 AD 3 619806 SAMD9L 611170
7q22-q32 Spinocerebellar ataxia 18 AD 2 607458 SCA18 607458
7q32-q33 Spinocerebellar ataxia 32 AD 2 613909 SCA32 613909
11q12 Spinocerebellar ataxia 20 AD 4 608687 SCA20 608687
11q13.2 Spinocerebellar ataxia 5 AD 3 600224 SPTBN2 604985
12q24.12 Spinocerebellar ataxia 2 AD 3 183090 ATXN2 601517
12q24.12 {Amyotrophic lateral sclerosis, susceptibility to, 13} AD 3 183090 ATXN2 601517
13q21 Spinocerebellar ataxia 8 AD 3 608768 ATXN8 613289
13q21.33 Spinocerebellar ataxia 8 AD 3 608768 ATXN8OS 603680
13q33.1 Spinocerebellar ataxia 27A AD 3 193003 FGF14 601515
13q33.1 Spinocerebellar ataxia 27B, late-onset AD 3 620174 FGF14 601515
14q32.11-q32.12 ?Spinocerebellar ataxia 40 AD 3 616053 CCDC88C 611204
14q32.12 Machado-Joseph disease AD 3 109150 ATXN3 607047
15q15.2 Spinocerebellar ataxia 11 AD 3 604432 TTBK2 611695
16p13.3 Spinocerebellar ataxia 48 AD 3 618093 STUB1 607207
16q21 Spinocerebellar ataxia 31 AD 3 117210 BEAN1 612051
16q22.2-q22.3 Spinocerebellar ataxia 4 AD 3 600223 ZFHX3 104155
17q21.33 Spinocerebellar ataxia 42 AD 3 616795 CACNA1G 604065
17q25.3 Spinocerebellar ataxia 50 AD 3 620158 NPTX1 602367
18p11.21 Spinocerebellar ataxia 28 AD 3 610246 AFG3L2 604581
19p13.3 ?Spinocerebellar ataxia 26 AD 3 609306 EEF2 130610
19p13.13 Spinocerebellar ataxia 6 AD 3 183086 CACNA1A 601011
19q13.2 ?Spinocerebellar ataxia 46 AD 3 617770 PLD3 615698
19q13.33 Spinocerebellar ataxia 13 AD 3 605259 KCNC3 176264
19q13.42 Spinocerebellar ataxia 14 AD 3 605361 PRKCG 176980
20p13 Spinocerebellar ataxia 23 AD 3 610245 PDYN 131340
20p13 Spinocerebellar ataxia 35 AD 3 613908 TGM6 613900
20p13 Spinocerebellar ataxia 36 AD 3 614153 NOP56 614154
22q13.31 Spinocerebellar ataxia 10 AD 3 603516 ATXN10 611150
Not Mapped Spinocerebellar ataxia 9 612876 SCA9 612876

TEXT

A number sign (#) is used with this entry because spinocerebellar ataxia-36 (SCA36) is caused by heterozygous expansion of an intronic GGCCTG hexanucleotide repeat in the NOP56 gene (614154) on chromosome 20p13. Unaffected individuals carry 3 to 14 repeats, whereas affected individuals carry 650 to 2,500 repeats (Kobayashi et al., 2011 and Garcia-Murias et al., 2012).


Description

Spinocerebellar ataxia-36 (SCA36) is a slowly progressive neurodegenerative disorder characterized by adult-onset gait ataxia, eye movement abnormalities, tongue fasciculations, and variable upper motor neuron signs. Some affected individuals may develop hearing loss (summary by Garcia-Murias et al., 2012).

For a general discussion of autosomal dominant spinocerebellar ataxia, see SCA1 (164400).


Clinical Features

Kobayashi et al. (2011) reported 5 unrelated Japanese families with an autosomal dominant form of spinocerebellar ataxia. The mean age at onset of gait ataxia, truncal instability, dysarthria, and limb incoordination was 52.8 years. An unusual feature for SCA was the late onset of motor neuron involvement in those with longer disease duration. Affected individuals developed tongue atrophy with fasciculation, although swallowing function was relatively preserved. Skeletal muscle atrophy and fasciculation in the limbs and trunk were observed in advanced cases. Most patients had hyperreflexia, but none had severe lower limb spasticity or extensor plantar responses. Brain MRI showed mild cerebellar atrophy. Nerve conduction studies were normal, whereas EMG showed neurogenic changes only in cases with skeletal muscle atrophy, indicating a lower motor neuropathy. The pattern of muscle involvement and progression differed from that seen in amyotrophic lateral sclerosis (ALS; 105400).

Ikeda et al. (2012) studied in detail 14 of 18 individuals from 9 Japanese families with genetically confirmed SCA36. The mean age at onset was 53.1 years, and most presented with truncal ataxia. All affected patients showed cerebellar ataxia manifest as ataxic dysarthria, limb ataxia, and dysdiadochokinesis. Many had hyperreflexia (79%) and increased muscle tone (29%), but none had extensor plantar responses. Impaired smooth pursuit and horizontal gaze nystagmus were found in 93% and 29%, respectively, and tongue atrophy or fasciculation was found in 10 patients (71%). Dysphagia was observed, but did not impair oral intake for at least 10 years after disease onset. Nine patients (64%) had skeletal muscle atrophy in the distal limbs and trunk, with fasciculations in 8. None had sensory disturbance, parkinsonism, or urinary disturbance. Skeletal muscle biopsy of 1 patient showed grouped atrophy of the fibers, small angular fibers, and pyknotic nuclear clumps, consistent with neurogenic atrophy and chronic denervation. Brain imaging showed atrophy of the cerebellar vermis and hemispheres and dilation of the fourth ventricle. Neuropathologic examination of 1 patient showed marked neuronal loss in the Purkinje cell layer of the cerebellum. There was also loss of motor neurons in the hypoglossal nucleus and the anterior horn of the upper cervical spinal cord. No NOP56 aggregates or inclusions were found.

Garcia-Murias et al. (2012) identified 2 large SCA36 kindreds originating from Costa da Morte in Galicia, Spain, a historically isolated region. Extensive family interviews and document studies allowed the reconstruction of over 650 individuals spanning 7 generations in each of the 2 families. Eight additional families from the same geographic region with a similar disorder were subsequently identified. The phenotype was homogeneous, with onset of gait difficulties due to ataxia in the late forties or early fifties. Most patients had variable eye movement abnormalities, such as slow saccades, slow pursuit, and fixation instability. Some had vertical or horizontal gaze limitation, whereas only a few had nystagmus. In addition, almost all noticed progressive hearing loss, some even before the balance problems. Other features included limb ataxia, dysarthria, some dysphagia, tongue fasciculations, hyperreflexia, and occasional extensor plantar responses. Brain MRI showed atrophy of the cerebellar vermis in the initial stages, later evolving to olivopontocerebellar atrophy. Lower limb somatosensory evoked potentials were abnormal in all individuals in whom it was tested, suggesting involvement of the central sensory tracts. The disorder was slowly progressive, with most patients remaining ambulatory for 15 to 20 years after onset. There was some evidence of genetic anticipation.


Inheritance

The transmission pattern of SCA36 in the families reported by Kobayashi et al. (2011) was consistent with autosomal dominant inheritance. There was no negative association between age of onset and number of repeats and no obvious anticipation in the pedigrees.


Mapping

By genomewide linkage analysis of 2 large kindreds originating from a historically isolated region in Galicia, Spain with autosomal dominant SCA, Garcia-Murias et al. (2012) found linkage to a 2-cM region on chromosome 20p between rs2422752 and D20S181 (maximum 2-point lod score of 9.8 at D20S842).


Molecular Genetics

By genomewide linkage analysis followed by candidate gene sequencing and repeat analysis of 5 Japanese families with spinocerebellar ataxia-36, Kobayashi et al. (2011) identified a pathogenic heterozygous 6-bp repeat expansion (GGCCTG; rs68063608) in intron 1 of the NOP56 gene (614154.0001). Four additional patients with SCA carrying this repeat expansion were identified. Overall, 9 (3.6%) unrelated cases were found among 251 cohort patients. Fluorescence in situ hybridization of patient lymphoblastoid cells showed RNA foci, which were not found in controls, and double staining and gel-shift assays showed that the expanded GGCCUG repeat bound and sequestered the RNA-binding protein SFRS2 (600813), whereas (CUG)(6) did not. In addition, transcription of MIR1292 (614155), located within intron 1 of NOP56, was significantly decreased in lymphoblastoid cells of SCA patients. The findings indicated that SCA36 is caused by hexanucleotide repeat expansions through a toxic gain of function.

By linkage analysis followed by detailed examination of the candidate region on chromosome 20p in 2 large kindreds from northern Spain with SCA, Garcia-Murias et al. (2012) identified a pathogenic expanded GGCCTG repeat in intron 1 of the NOP56 gene. A similar genetic pattern was then observed in 8 additional probands with SCA from the same geographic region. The size of expanded alleles ranged from 650 to 2,500 repeats, and there was some evidence for genetic anticipation.


Population Genetics

All the patients with SCA36 reported by Kobayashi et al. (2011) were from the Chugoku district in western Japan, and haplotype analysis indicated that the molecular basis for the disease was due to a founder effect.

Ikeda et al. (2012) reported 9 families with genetically confirmed SCA36, all of whom lived in the western part of Japan along the Asida River.

Garcia-Murias et al. (2012) determined that SCA36 was the most common form of SCA in Galicia, Spain. The founder repeat mutation in the NOP56 gene (614154.0001) was estimated to have occurred in that region about 1,275 years ago. Ten (6.3%) of 160 Galician families with SCA had SCA36, whereas 9.4% had other forms of routinely tested SCA types.


REFERENCES

  1. Garcia-Murias, M., Quintans, B., Arias, M., Seixas, A. I., Cacheiro, P., Tarrio, R., Pardo, J., Millan, M. J., Arias-Rivas, S., Blanco-Arias, P., Dapena, D., Moreira, R., Rodriguez-Trelles, F., Sequeiros, J., Carracedo, A., Silveira, I., Sobrido, M. J. 'Costa da Morte' ataxia is spinocerebellar ataxia 36: clinical and genetic characterization. Brain 135: 1423-1435, 2012. [PubMed: 22492559, images, related citations] [Full Text]

  2. Ikeda, Y., Ohta, Y., Kobayashi, H., Okamoto, M., Takamatsu, K., Ota, T., Manabe, Y., Okamoto, K., Koizumi, A., Abe, K. Clinical features of SCA36: a novel spinocerebellar ataxia with motor neuron involvement (Asidan). Neurology 79: 333-341, 2012. [PubMed: 22744658, related citations] [Full Text]

  3. Kobayashi, H., Abe, K., Matsuura, T., Ikeda, Y., Hitomi, T., Akechi, Y., Habu, T., Liu, W., Okuda, H., Koizumi, A. Expansion of intronic GGCCTG hexanucleotide repeat in NOP56 causes SCA36, a type of spinocerebellar ataxia accompanied by motor neuron involvement. Am. J. Hum. Genet. 89: 121-130, 2011. [PubMed: 21683323, images, related citations] [Full Text]


Cassandra L. Kniffin - updated : 1/28/2013
Cassandra L. Kniffin - updated : 10/1/2012
Creation Date:
Cassandra L. Kniffin : 8/8/2011
carol : 09/26/2023
carol : 01/11/2018
carol : 06/24/2016
alopez : 2/5/2013
ckniffin : 1/28/2013
carol : 10/16/2012
ckniffin : 10/1/2012
carol : 9/2/2011
ckniffin : 8/31/2011

# 614153

SPINOCEREBELLAR ATAXIA 36; SCA36


SNOMEDCT: 711158005;   ORPHA: 276198;   DO: 0050983;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
20p13 Spinocerebellar ataxia 36 614153 Autosomal dominant 3 NOP56 614154

TEXT

A number sign (#) is used with this entry because spinocerebellar ataxia-36 (SCA36) is caused by heterozygous expansion of an intronic GGCCTG hexanucleotide repeat in the NOP56 gene (614154) on chromosome 20p13. Unaffected individuals carry 3 to 14 repeats, whereas affected individuals carry 650 to 2,500 repeats (Kobayashi et al., 2011 and Garcia-Murias et al., 2012).


Description

Spinocerebellar ataxia-36 (SCA36) is a slowly progressive neurodegenerative disorder characterized by adult-onset gait ataxia, eye movement abnormalities, tongue fasciculations, and variable upper motor neuron signs. Some affected individuals may develop hearing loss (summary by Garcia-Murias et al., 2012).

For a general discussion of autosomal dominant spinocerebellar ataxia, see SCA1 (164400).


Clinical Features

Kobayashi et al. (2011) reported 5 unrelated Japanese families with an autosomal dominant form of spinocerebellar ataxia. The mean age at onset of gait ataxia, truncal instability, dysarthria, and limb incoordination was 52.8 years. An unusual feature for SCA was the late onset of motor neuron involvement in those with longer disease duration. Affected individuals developed tongue atrophy with fasciculation, although swallowing function was relatively preserved. Skeletal muscle atrophy and fasciculation in the limbs and trunk were observed in advanced cases. Most patients had hyperreflexia, but none had severe lower limb spasticity or extensor plantar responses. Brain MRI showed mild cerebellar atrophy. Nerve conduction studies were normal, whereas EMG showed neurogenic changes only in cases with skeletal muscle atrophy, indicating a lower motor neuropathy. The pattern of muscle involvement and progression differed from that seen in amyotrophic lateral sclerosis (ALS; 105400).

Ikeda et al. (2012) studied in detail 14 of 18 individuals from 9 Japanese families with genetically confirmed SCA36. The mean age at onset was 53.1 years, and most presented with truncal ataxia. All affected patients showed cerebellar ataxia manifest as ataxic dysarthria, limb ataxia, and dysdiadochokinesis. Many had hyperreflexia (79%) and increased muscle tone (29%), but none had extensor plantar responses. Impaired smooth pursuit and horizontal gaze nystagmus were found in 93% and 29%, respectively, and tongue atrophy or fasciculation was found in 10 patients (71%). Dysphagia was observed, but did not impair oral intake for at least 10 years after disease onset. Nine patients (64%) had skeletal muscle atrophy in the distal limbs and trunk, with fasciculations in 8. None had sensory disturbance, parkinsonism, or urinary disturbance. Skeletal muscle biopsy of 1 patient showed grouped atrophy of the fibers, small angular fibers, and pyknotic nuclear clumps, consistent with neurogenic atrophy and chronic denervation. Brain imaging showed atrophy of the cerebellar vermis and hemispheres and dilation of the fourth ventricle. Neuropathologic examination of 1 patient showed marked neuronal loss in the Purkinje cell layer of the cerebellum. There was also loss of motor neurons in the hypoglossal nucleus and the anterior horn of the upper cervical spinal cord. No NOP56 aggregates or inclusions were found.

Garcia-Murias et al. (2012) identified 2 large SCA36 kindreds originating from Costa da Morte in Galicia, Spain, a historically isolated region. Extensive family interviews and document studies allowed the reconstruction of over 650 individuals spanning 7 generations in each of the 2 families. Eight additional families from the same geographic region with a similar disorder were subsequently identified. The phenotype was homogeneous, with onset of gait difficulties due to ataxia in the late forties or early fifties. Most patients had variable eye movement abnormalities, such as slow saccades, slow pursuit, and fixation instability. Some had vertical or horizontal gaze limitation, whereas only a few had nystagmus. In addition, almost all noticed progressive hearing loss, some even before the balance problems. Other features included limb ataxia, dysarthria, some dysphagia, tongue fasciculations, hyperreflexia, and occasional extensor plantar responses. Brain MRI showed atrophy of the cerebellar vermis in the initial stages, later evolving to olivopontocerebellar atrophy. Lower limb somatosensory evoked potentials were abnormal in all individuals in whom it was tested, suggesting involvement of the central sensory tracts. The disorder was slowly progressive, with most patients remaining ambulatory for 15 to 20 years after onset. There was some evidence of genetic anticipation.


Inheritance

The transmission pattern of SCA36 in the families reported by Kobayashi et al. (2011) was consistent with autosomal dominant inheritance. There was no negative association between age of onset and number of repeats and no obvious anticipation in the pedigrees.


Mapping

By genomewide linkage analysis of 2 large kindreds originating from a historically isolated region in Galicia, Spain with autosomal dominant SCA, Garcia-Murias et al. (2012) found linkage to a 2-cM region on chromosome 20p between rs2422752 and D20S181 (maximum 2-point lod score of 9.8 at D20S842).


Molecular Genetics

By genomewide linkage analysis followed by candidate gene sequencing and repeat analysis of 5 Japanese families with spinocerebellar ataxia-36, Kobayashi et al. (2011) identified a pathogenic heterozygous 6-bp repeat expansion (GGCCTG; rs68063608) in intron 1 of the NOP56 gene (614154.0001). Four additional patients with SCA carrying this repeat expansion were identified. Overall, 9 (3.6%) unrelated cases were found among 251 cohort patients. Fluorescence in situ hybridization of patient lymphoblastoid cells showed RNA foci, which were not found in controls, and double staining and gel-shift assays showed that the expanded GGCCUG repeat bound and sequestered the RNA-binding protein SFRS2 (600813), whereas (CUG)(6) did not. In addition, transcription of MIR1292 (614155), located within intron 1 of NOP56, was significantly decreased in lymphoblastoid cells of SCA patients. The findings indicated that SCA36 is caused by hexanucleotide repeat expansions through a toxic gain of function.

By linkage analysis followed by detailed examination of the candidate region on chromosome 20p in 2 large kindreds from northern Spain with SCA, Garcia-Murias et al. (2012) identified a pathogenic expanded GGCCTG repeat in intron 1 of the NOP56 gene. A similar genetic pattern was then observed in 8 additional probands with SCA from the same geographic region. The size of expanded alleles ranged from 650 to 2,500 repeats, and there was some evidence for genetic anticipation.


Population Genetics

All the patients with SCA36 reported by Kobayashi et al. (2011) were from the Chugoku district in western Japan, and haplotype analysis indicated that the molecular basis for the disease was due to a founder effect.

Ikeda et al. (2012) reported 9 families with genetically confirmed SCA36, all of whom lived in the western part of Japan along the Asida River.

Garcia-Murias et al. (2012) determined that SCA36 was the most common form of SCA in Galicia, Spain. The founder repeat mutation in the NOP56 gene (614154.0001) was estimated to have occurred in that region about 1,275 years ago. Ten (6.3%) of 160 Galician families with SCA had SCA36, whereas 9.4% had other forms of routinely tested SCA types.


REFERENCES

  1. Garcia-Murias, M., Quintans, B., Arias, M., Seixas, A. I., Cacheiro, P., Tarrio, R., Pardo, J., Millan, M. J., Arias-Rivas, S., Blanco-Arias, P., Dapena, D., Moreira, R., Rodriguez-Trelles, F., Sequeiros, J., Carracedo, A., Silveira, I., Sobrido, M. J. 'Costa da Morte' ataxia is spinocerebellar ataxia 36: clinical and genetic characterization. Brain 135: 1423-1435, 2012. [PubMed: 22492559] [Full Text: https://doi.org/10.1093/brain/aws069]

  2. Ikeda, Y., Ohta, Y., Kobayashi, H., Okamoto, M., Takamatsu, K., Ota, T., Manabe, Y., Okamoto, K., Koizumi, A., Abe, K. Clinical features of SCA36: a novel spinocerebellar ataxia with motor neuron involvement (Asidan). Neurology 79: 333-341, 2012. [PubMed: 22744658] [Full Text: https://doi.org/10.1212/WNL.0b013e318260436f]

  3. Kobayashi, H., Abe, K., Matsuura, T., Ikeda, Y., Hitomi, T., Akechi, Y., Habu, T., Liu, W., Okuda, H., Koizumi, A. Expansion of intronic GGCCTG hexanucleotide repeat in NOP56 causes SCA36, a type of spinocerebellar ataxia accompanied by motor neuron involvement. Am. J. Hum. Genet. 89: 121-130, 2011. [PubMed: 21683323] [Full Text: https://doi.org/10.1016/j.ajhg.2011.05.015]


Contributors:
Cassandra L. Kniffin - updated : 1/28/2013
Cassandra L. Kniffin - updated : 10/1/2012

Creation Date:
Cassandra L. Kniffin : 8/8/2011

Edit History:
carol : 09/26/2023
carol : 01/11/2018
carol : 06/24/2016
alopez : 2/5/2013
ckniffin : 1/28/2013
carol : 10/16/2012
ckniffin : 10/1/2012
carol : 9/2/2011
ckniffin : 8/31/2011