Entry - #619525 - CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIw; CDG2W - OMIM
 
# 619525

CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIw; CDG2W


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
11q23.3 Congenital disorder of glycosylation, type IIw 619525 AD 3 SLC37A4 602671
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
GROWTH
Other
- Failure to thrive
HEAD & NECK
Eyes
- Hypertelorism
- Strabismus
Mouth
- Micrognathia
- Ankyloglossia
CARDIOVASCULAR
Heart
- Ventricular septal defect (some patients)
- Tetralogy of Fallot (in 1 patient)
CHEST
Ribs Sternum Clavicles & Scapulae
- Pectus carinatum
ABDOMEN
Liver
- Steatosis
- Hepatic fibrosis
- Bile duct proliferation
Gastrointestinal
- Gastroesophageal reflux
GENITOURINARY
Kidneys
- Membranoproliferative glomerulonephritis (in 1 patient)
SKELETAL
Spine
- Scoliosis
ENDOCRINE FEATURES
- Diabetes mellitus (in 1 patient)
HEMATOLOGY
- Anemia
- Thrombocytopenia
- Coagulopathy
LABORATORY ABNORMALITIES
- Increased liver transaminases
- CDG type II pattern seen on transferrin isoelectric focusing
MOLECULAR BASIS
- Caused by mutation solute carrier family 37 (glucose-6-phosphate transporter), member 4 gene (SLC37A4, 602671.0017)
Congenital disorders of glycosylation, type II - PS212066 - 26 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1q25.3 Congenital disorder of glycosylation, type IIv AR 3 619493 EDEM3 610214
1q42.13 Congenital disorder of glycosylation, type IIt AR 3 618885 GALNT2 602274
1q42.2 ?Congenital disorder of glycosylation, type IIq AR 3 617395 COG2 606974
2p13.1 Congenital disorder of glycosylation, type IIb AR 3 606056 MOGS 601336
2q21.1 Congenital disorder of glycosylation, type IIo AR 3 616828 CCDC115 613734
4q12 Congenital disorder of glycosylation, type IIk AR 3 614727 TMEM165 614726
4q24 Congenital disorder of glycosylation, type IIn AR 3 616721 SLC39A8 608732
5q31.1 ?Congenital disorder of glycosylation, type IIz AR 3 620201 CAMLG 601118
6q15 Congenital disorder of glycosylation, type IIf AR 3 603585 SLC35A1 605634
7p22.3 ?Congenital disorder of glycosylation, type IIy AR 3 620200 GET4 612056
7q22.3 Congenital disorder of glycosylation, type IIi AR 3 613612 COG5 606821
9p21.1 Congenital disorder of glycosylation, type IId AR 3 607091 B4GALT1 137060
11p11.2 Congenital disorder of glycosylation, type IIc AR 3 266265 SLC35C1 605881
11q12.3 ?Congenital disorder of glycosylation, type IIaa AR 3 620454 STX5 603189
11q23.3 Congenital disorder of glycosylation, type IIw AD 3 619525 SLC37A4 602671
13q14.11 Congenital disorder of glycosylation, type IIl AR 3 614576 COG6 606977
13q14.13 Congenital disorder of glycosylation, type IIbb AR 3 620546 COG3 606975
14q21.3 Congenital disorder of glycosylation, type IIa AR 3 212066 MGAT2 602616
16p12.2 Congenital disorder of glycosylation, type IIe AR 3 608779 COG7 606978
16q22.1 Congenital disorder of glycosylation, type IIh 3 611182 COG8 606979
16q22.1 Congenital disorder of glycosylation, type IIj AR 3 613489 COG4 606976
17q11.2 Congenital disorder of glycosylation, type IIp AR 3 616829 TMEM199 616815
17q25.1 Congenital disorder of glycosylation, type IIg AR 3 611209 COG1 606973
Xp11.4 Congenital disorder of glycosylation, type IIr XLR 3 301045 ATP6AP2 300556
Xp11.23 Congenital disorder of glycosylation, type IIm SMo, XLD 3 300896 SLC35A2 314375
Xq28 Immunodeficiency 47 XLR 3 300972 ATP6AP1 300197

TEXT

A number sign (#) is used with this entry because of evidence that congenital disorder of glycosylation type IIw (CDG2W) is caused by a heterozygous mutation in the G6PT1 gene (SLC37A4; 602671), which encodes glucose-6-phosphate translocase, on chromosome 11q23.


Description

Congenital disorder of glycosylation type IIw (CDG2W) is an autosomal dominant metabolic disorder characterized by liver dysfunction, coagulation deficiencies, and profound abnormalities in N-glycosylation of serum specific proteins. All reported patients carry the same mutation (602671.0017) (summary by Ng et al., 2021).

For an overview of congenital disorders of glycosylation, see CDG1A (212065) and CDG2A (212066).


Clinical Features

Marquardt et al. (2020) reported a girl who was treated for gastroesophageal reflux and ankyloglossia in infancy; at 10 weeks of age she had developed hepatopathy and failure to thrive. Laboratory tests showed elevated serum transaminases, thrombocytopenia, elevated INR, moderate anemia, prolonged activated partial thromboplastin time (APTT), and multiple clotting factor abnormalities. Liver biopsy at 3 months of age showed steatosis and increased hepatocyte volume. Isoelectric focusing of serum transferrin (190000) showed a CDG type II pattern. She learned to walk at 2 years of age, but development was otherwise normal. At 5 years of age, hepatopathy and coagulopathy had become milder. She was also noted to have a pectus carinatum. Facial dysmorphism included bilateral choanal atresia, low-set ears, broad nose, micrognathia, and facial asymmetry. At 12 years of age, she had normal psychomotor development and was noted to be well, with mild elevation in AST and mild hypercoagulability.

Wilson et al. (2021) reported a patient with CDG2W who had prolonged jaundice, hepatomegaly, mild splenomegaly, anemia, elevated transaminases, elevated APTT, elevated prothrombin time (PT), and decreased fibrinogen (see 134820) in infancy. Liver biopsy at 4 months of age showed fibrosis and bile duct proliferation. She had normal growth and psychomotor development, but during childhood she had persistent hepatomegaly and worsening coagulopathy. At 8 years of age she developed insulin-dependent diabetes. During adolescence she developed progressive scoliosis and membranoproliferative glomerulonephritis.

Ng et al. (2021) reported 7 patients from 4 families, ages 1 month to 42 years, with liver dysfunction, multifactorial coagulation abnormalities, and abnormal N-glycosylation of serum proteins. One patient had ankyloglossia, 3 patients had cardiac abnormalities (including 2 with ventricular septal defects and 1 with tetralogy of Fallot), and 3 patients had scoliosis. All 7 patients had an abnormal type II carbohydrate-deficient transferrin (CDT) and O-glycan apoC-III testing. All 7 patients had decreased coagulation factor II (thrombin) (F2; 176930) and antithrombin (SERPINC1; 107300) activities; 6 of 7 patients had reduced F5 (612309) activity; 6 of 6 patients had reduced F11 (264900) activity; 5 of 7 had reduced protein S (PROS1; 176880); and 4 of 6 had reduced F9 (300746). All 7 patients had elevated aspartate aminotransferase (AST) levels, and none had elevated alanine aminotransferase (ALT).


Inheritance

The transmission pattern of CDG2W in 2 families reported by Ng et al. (2021) was consistent with autosomal dominant inheritance. The heterozygous mutations in the SLC37A4 gene that were identified in patients with CDG2W by Marquardt et al. (2020) and Wilson et al. (2021) occurred de novo.


Molecular Genetics

In a patient with CDG2W, Marquardt et al. (2020) identified a heterozygous mutation (R423X; 602671.0017) in the SLC37A4 gene. The de novo mutation was identified by trio whole-exome sequencing. The mutation was predicted to remove an endoplasmic reticulum retention signal and expose a weak Golgi retention signal. Expression of the mutant protein in HepG2 cells and subsequent immunolocalization studies suggested that it mislocalized to the Golgi. The patient had a CDG type II glycosylation pattern on serum transferrin isoelectric focusing, and HPLC analysis of serum transferrin showed severe hypoglycosylation.

Wilson et al. (2021) identified heterozygosity for the R423X mutation in a patient with CDG2W. The de novo mutation was identified by whole-exome sequencing and confirmed by Sanger sequencing.

Ng et al. (2021) identified heterozygosity for the R423X mutation in 7 patients from 4 families, including a mother and son from one family and a mother, son, and daughter from another family, with CDG2W. Analysis of Huh7 cells expressing SLC37A4 with the R423X mutation showed that the mutant protein likely localized to an undefined intermediate subcompartment between the total ER and the cis-Golgi, leading to lowered Golgi pH.


REFERENCES

  1. Marquardt, T., Bzduch, V., Hogrebe, M., Rust, S., Reunert, J., Gruneberg, M., Park, J., Callewaert, N., Lachmann, R., Wada, Y., Engel, T. SLC37A4-CDG: mislocalization of the glucose-6-phosphate transporter to the Golgi causes a new congenital disorder of glycosylation. Molec. Genet. Metab. Rep. 25: 100636, 2020. [PubMed: 32884905, images, related citations] [Full Text]

  2. Ng, B. G., Sosicka, P., Fenaille, F., Harroche, A., Vuillaumier-Barrot, S., Porterfield, M., Xia, Z.-J., Wagner, S., Bamshad, M. J., Vergnes-Boiteux, M.-C., Cholet, S., Dalton, S., and 21 others. A mutation in SLC37A4 causes a dominantly inherited congenital disorder of glycosylation characterized by liver dysfunction. Am. J. Hum. Genet. 108: 1040-1052, 2021. [PubMed: 33964207, related citations] [Full Text]

  3. Wilson, M. P., Quelhas, D., Leao-Teles, E., Sturiale, L., Rymen, D., Keldermans, L., Race, V., Souche, E., Rodrigues, E., Campos, T., Van Schaftingen, E., Foulquier, F., Garozzo, D., Matthijs, G., Jaeken, J. SLC37A4-CDG: second patient. JIMD Rep. 58: 122-128, 2021. [PubMed: 33728255, images, related citations] [Full Text]


Creation Date:
Hilary J. Vernon : 09/10/2021
alopez : 09/10/2021
alopez : 09/10/2021

# 619525

CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIw; CDG2W


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
11q23.3 Congenital disorder of glycosylation, type IIw 619525 Autosomal dominant 3 SLC37A4 602671

TEXT

A number sign (#) is used with this entry because of evidence that congenital disorder of glycosylation type IIw (CDG2W) is caused by a heterozygous mutation in the G6PT1 gene (SLC37A4; 602671), which encodes glucose-6-phosphate translocase, on chromosome 11q23.


Description

Congenital disorder of glycosylation type IIw (CDG2W) is an autosomal dominant metabolic disorder characterized by liver dysfunction, coagulation deficiencies, and profound abnormalities in N-glycosylation of serum specific proteins. All reported patients carry the same mutation (602671.0017) (summary by Ng et al., 2021).

For an overview of congenital disorders of glycosylation, see CDG1A (212065) and CDG2A (212066).


Clinical Features

Marquardt et al. (2020) reported a girl who was treated for gastroesophageal reflux and ankyloglossia in infancy; at 10 weeks of age she had developed hepatopathy and failure to thrive. Laboratory tests showed elevated serum transaminases, thrombocytopenia, elevated INR, moderate anemia, prolonged activated partial thromboplastin time (APTT), and multiple clotting factor abnormalities. Liver biopsy at 3 months of age showed steatosis and increased hepatocyte volume. Isoelectric focusing of serum transferrin (190000) showed a CDG type II pattern. She learned to walk at 2 years of age, but development was otherwise normal. At 5 years of age, hepatopathy and coagulopathy had become milder. She was also noted to have a pectus carinatum. Facial dysmorphism included bilateral choanal atresia, low-set ears, broad nose, micrognathia, and facial asymmetry. At 12 years of age, she had normal psychomotor development and was noted to be well, with mild elevation in AST and mild hypercoagulability.

Wilson et al. (2021) reported a patient with CDG2W who had prolonged jaundice, hepatomegaly, mild splenomegaly, anemia, elevated transaminases, elevated APTT, elevated prothrombin time (PT), and decreased fibrinogen (see 134820) in infancy. Liver biopsy at 4 months of age showed fibrosis and bile duct proliferation. She had normal growth and psychomotor development, but during childhood she had persistent hepatomegaly and worsening coagulopathy. At 8 years of age she developed insulin-dependent diabetes. During adolescence she developed progressive scoliosis and membranoproliferative glomerulonephritis.

Ng et al. (2021) reported 7 patients from 4 families, ages 1 month to 42 years, with liver dysfunction, multifactorial coagulation abnormalities, and abnormal N-glycosylation of serum proteins. One patient had ankyloglossia, 3 patients had cardiac abnormalities (including 2 with ventricular septal defects and 1 with tetralogy of Fallot), and 3 patients had scoliosis. All 7 patients had an abnormal type II carbohydrate-deficient transferrin (CDT) and O-glycan apoC-III testing. All 7 patients had decreased coagulation factor II (thrombin) (F2; 176930) and antithrombin (SERPINC1; 107300) activities; 6 of 7 patients had reduced F5 (612309) activity; 6 of 6 patients had reduced F11 (264900) activity; 5 of 7 had reduced protein S (PROS1; 176880); and 4 of 6 had reduced F9 (300746). All 7 patients had elevated aspartate aminotransferase (AST) levels, and none had elevated alanine aminotransferase (ALT).


Inheritance

The transmission pattern of CDG2W in 2 families reported by Ng et al. (2021) was consistent with autosomal dominant inheritance. The heterozygous mutations in the SLC37A4 gene that were identified in patients with CDG2W by Marquardt et al. (2020) and Wilson et al. (2021) occurred de novo.


Molecular Genetics

In a patient with CDG2W, Marquardt et al. (2020) identified a heterozygous mutation (R423X; 602671.0017) in the SLC37A4 gene. The de novo mutation was identified by trio whole-exome sequencing. The mutation was predicted to remove an endoplasmic reticulum retention signal and expose a weak Golgi retention signal. Expression of the mutant protein in HepG2 cells and subsequent immunolocalization studies suggested that it mislocalized to the Golgi. The patient had a CDG type II glycosylation pattern on serum transferrin isoelectric focusing, and HPLC analysis of serum transferrin showed severe hypoglycosylation.

Wilson et al. (2021) identified heterozygosity for the R423X mutation in a patient with CDG2W. The de novo mutation was identified by whole-exome sequencing and confirmed by Sanger sequencing.

Ng et al. (2021) identified heterozygosity for the R423X mutation in 7 patients from 4 families, including a mother and son from one family and a mother, son, and daughter from another family, with CDG2W. Analysis of Huh7 cells expressing SLC37A4 with the R423X mutation showed that the mutant protein likely localized to an undefined intermediate subcompartment between the total ER and the cis-Golgi, leading to lowered Golgi pH.


REFERENCES

  1. Marquardt, T., Bzduch, V., Hogrebe, M., Rust, S., Reunert, J., Gruneberg, M., Park, J., Callewaert, N., Lachmann, R., Wada, Y., Engel, T. SLC37A4-CDG: mislocalization of the glucose-6-phosphate transporter to the Golgi causes a new congenital disorder of glycosylation. Molec. Genet. Metab. Rep. 25: 100636, 2020. [PubMed: 32884905] [Full Text: https://doi.org/10.1016/j.ymgmr.2020.100636]

  2. Ng, B. G., Sosicka, P., Fenaille, F., Harroche, A., Vuillaumier-Barrot, S., Porterfield, M., Xia, Z.-J., Wagner, S., Bamshad, M. J., Vergnes-Boiteux, M.-C., Cholet, S., Dalton, S., and 21 others. A mutation in SLC37A4 causes a dominantly inherited congenital disorder of glycosylation characterized by liver dysfunction. Am. J. Hum. Genet. 108: 1040-1052, 2021. [PubMed: 33964207] [Full Text: https://doi.org/10.1016/j.ajhg.2021.04.013]

  3. Wilson, M. P., Quelhas, D., Leao-Teles, E., Sturiale, L., Rymen, D., Keldermans, L., Race, V., Souche, E., Rodrigues, E., Campos, T., Van Schaftingen, E., Foulquier, F., Garozzo, D., Matthijs, G., Jaeken, J. SLC37A4-CDG: second patient. JIMD Rep. 58: 122-128, 2021. [PubMed: 33728255] [Full Text: https://doi.org/10.1002/jmd2.12195]


Creation Date:
Hilary J. Vernon : 09/10/2021

Edit History:
alopez : 09/10/2021
alopez : 09/10/2021