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Select item 94091021.

Targeted Modification of Mammalian DNA by a Novel Type V Cas12a Endonuclease from Ruminococcus bromii

Ruslan Vasilev, Natalia Gunitseva, Regina Shebanova, Aleksei Korzhenkov, Anna Vlaskina, Marta Evteeva, Irina Polushkina, Natalia Nikitchina, Stepan Toshchakov, Piotr Kamenski, Maxim Patrushev, Ilya Mazunin

Int J Mol Sci. 2022 Aug; 23(16): 9289. Published online 2022 Aug 18. doi: 10.3390/ijms23169289

PMCID:: PMC9409102

Abstract Article PDF–4.4M

Select item 93870742.

Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies

Yangyang Jia, Shengguo Zhao, Wenjie Guo, Ling Peng, Fang Zhao, Lushan Wang, Guangyi Fan, Yuanfang Zhu, Dayou Xu, Guilin Liu, Ruoqing Wang, Xiaodong Fang, He Zhang, Karsten Kristiansen, Wenwei Zhang, Jianwei Chen

Environ Microbiome. 2022; 17: 43. Published online 2022 Aug 17. doi: 10.1186/s40793-022-00436-y

PMCID:: PMC9387074

Abstract Article PDF–6.6M

Select item 92580913.

Induction of mastitis by cow-to-mouse fecal and milk microbiota transplantation causes microbiome dysbiosis and genomic functional perturbation in mice

M. Nazmul Hoque, M. Shaminur Rahman, Tofazzal Islam, Munawar Sultana, Keith A. Crandall, M. Anwar Hossain

Anim Microbiome. 2022; 4: 43. Published online 2022 Jul 6. doi: 10.1186/s42523-022-00193-w

PMCID:: PMC9258091

Abstract Article PDF–9.7M

Select item 86241974.

Bioconversion of Lignocellulosic Biomass into Value Added Products under Anaerobic Conditions: Insight into Proteomic Studies

Martha Inés Vélez-Mercado, Alicia Guadalupe Talavera-Caro, Karla María Escobedo-Uribe, Salvador Sánchez-Muñoz, Miriam Paulina Luévanos-Escareño, Fernando Hernández-Terán, Alejandra Alvarado, Nagamani Balagurusamy

Int J Mol Sci. 2021 Nov; 22(22): 12249. Published online 2021 Nov 12. doi: 10.3390/ijms222212249

PMCID:: PMC8624197

Abstract Article PDF–2.1M

Select item 86272185.

Phylogenetic systematics of Butyrivibrio and Pseudobutyrivibrio genomes illustrate vast taxonomic diversity, open genomes and an abundance of carbohydrate-active enzyme family isoforms

Sara E. Pidcock, Timofey Skvortsov, Fernanda G. Santos, Stephen J. Courtney, Karen Sui-Ting, Christopher J. Creevey, Sharon A. Huws

Microb Genom. 2021; 7(10): 000638. Published online 2021 Oct 4. doi: 10.1099/mgen.0.000638

PMCID:: PMC8627218

Abstract Article PDF–7.8M

Select item 80769056.

Stability Assessment of the Rumen Bacterial and Archaeal Communities in Dairy Cows Within a Single Lactation and Its Association With Host Phenotype

Zhigang Zhu, Gareth Frank Difford, Samantha Joan Noel, Jan Lassen, Peter Løvendahl, Ole Højberg

Front Microbiol. 2021; 12: 636223. Published online 2021 Apr 6. doi: 10.3389/fmicb.2021.636223

PMCID:: PMC8076905

Abstract Article PDF–2.8M

Select item 79220227.

Ketoanalogs’ Effects on Intestinal Microbiota Modulation and Uremic Toxins Serum Levels in Chronic Kidney Disease (Medika2 Study)

Maria Teresa Rocchetti, Biagio Raffaele Di Iorio, Mirco Vacca, Carmela Cosola, Stefania Marzocco, Ighli di Bari, Francesco Maria Calabrese, Roberto Ciarcia, Maria De Angelis, Loreto Gesualdo

J Clin Med. 2021 Feb; 10(4): 840. Published online 2021 Feb 18. doi: 10.3390/jcm10040840

PMCID:: PMC7922022

Abstract Article PDF–2.4M

Select item 78929868.

Gut microbiome and Mediterranean diet in the context of obesity. Current knowledge, perspectives and potential therapeutic targets

Christina Tsigalou, Afroditi Paraschaki, Alexandros Karvelas, Konstantina Kantartzi, Kenan Gagali, Dimitrios Tsairidis, Eugenia Bezirtzoglou

Metabol Open. 2021 Mar; 9: 100081. Published online 2021 Feb 2. doi: 10.1016/j.metop.2021.100081

PMCID:: PMC7892986

Abstract Article PDF–331K

Select item 75875529.

Association of Moderate Beer Consumption with the Gut Microbiota and SCFA of Healthy Adults

Natalia González-Zancada, Noemí Redondo-Useros, Ligia E. Díaz, Sonia Gómez-Martínez, Ascensión Marcos, Esther Nova

Molecules. 2020 Oct; 25(20): 4772. Published online 2020 Oct 17. doi: 10.3390/molecules25204772

PMCID:: PMC7587552

Abstract Article PDF–1.2M

Select item 755185210.

Impact of a Moderately Hypocaloric Mediterranean Diet on the Gut Microbiota Composition of Italian Obese Patients

Silvia Pisanu, Vanessa Palmas, Veronica Madau, Emanuela Casula, Andrea Deledda, Roberto Cusano, Paolo Uva, Sarah Vascellari, Francesco Boi, Andrea Loviselli, Aldo Manzin, Fernanda Velluzzi

Nutrients. 2020 Sep; 12(9): 2707. Published online 2020 Sep 4. doi: 10.3390/nu12092707

PMCID:: PMC7551852

Abstract Article PDF–1.6M

Select item 696941711.

The differential distribution of bacteria between cancerous and noncancerous ovarian tissues in situ

Qi Wang, Lanbo Zhao, Lu Han, Guoxing Fu, Xiaoqian Tuo, Sijia Ma, Qing Li, Yiran Wang, Dongxin Liang, Miaomiao Tang, Chao Sun, Qing Wang, Qing Song, Qiling Li

J Ovarian Res. 2020; 13: 8. Published online 2020 Jan 18. doi: 10.1186/s13048-019-0603-4

PMCID:: PMC6969417

Abstract Article PDF–2.0M

Select item 699951112.

Bioaugmentation of anaerobic digesters treating lignocellulosic feedstock by enriched microbial consortia

Emine Gozde Ozbayram, Sabine Kleinsteuber, Marcell Nikolausz, Bahar Ince, Orhan Ince

Eng Life Sci. 2018 Jul; 18(7): 440–446. Published online 2018 May 14. doi: 10.1002/elsc.201700199

PMCID:: PMC6999511

Abstract Article PDF–620K

Select item 592801113.

Biogas production from different lignocellulosic biomass sources: advances and perspectives

Emir Martínez-Gutiérrez

3 Biotech. 2018 May; 8(5): 233. Published online 2018 Apr 30. doi: 10.1007/s13205-018-1257-4

PMCID:: PMC5928011

Abstract Article PDF–1.1M

Select item 547272014.

Monensin and Nisin Affect Rumen Fermentation and Microbiota Differently In Vitro

Junshi Shen, Zhuang Liu, Zhongtang Yu, Weiyun Zhu

Front Microbiol. 2017; 8: 1111. Published online 2017 Jun 16. doi: 10.3389/fmicb.2017.01111

PMCID:: PMC5472720

Abstract Article PDF–2.0M

Select item 460724915.

Towards microbiome transplant as a therapy for periodontitis: an exploratory study of periodontitis microbial signature contrasted by oral health, caries and edentulism

Alex E. Pozhitkov, Brian G. Leroux, Timothy W. Randolph, Thomas Beikler, Thomas F. Flemmig, Peter A. Noble

BMC Oral Health. 2015; 15: 125. Published online 2015 Oct 14. doi: 10.1186/s12903-015-0109-4

PMCID:: PMC4607249

Abstract Article PDF–1.6M

Select item 447889616.

Electron transport phosphorylation in rumen butyrivibrios: unprecedented ATP yield for glucose fermentation to butyrate

Timothy J. Hackmann, Jeffrey L. Firkins

Front Microbiol. 2015; 6: 622. Published online 2015 Jun 24. doi: 10.3389/fmicb.2015.00622

PMCID:: PMC4478896

Abstract Article PDF–1.2M

Select item 297230917.

Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model

Luiz FW Roesch, Graciela L Lorca, George Casella, Adriana Giongo, Andres Naranjo, Arianna M Pionzio, Nan Li, Volker Mai, Clive H Wasserfall, Desmond Schatz, Mark A Atkinson, Josef Neu, Eric W Triplett

ISME J. Author manuscript; available in PMC 2010 Nov 3.

Published in final edited form as: ISME J. 2009 May; 3(5): 536–548. Published online 2009 Feb 19. doi: 10.1038/ismej.2009.5

PMCID:: PMC2972309

Abstract Article PDF–522K

Select item 1077007418.

Multi-kingdom microbial signatures in excess body weight colorectal cancer based on global metagenomic analysis

Xinyue Zhu, Pingping Xu, Ruixin Zhu, Wenxing Gao, Wenjing Yin, Ping Lan, Lixin Zhu, Na Jiao

Commun Biol. 2024; 7: 24. Published online 2024 Jan 5. doi: 10.1038/s42003-023-05714-0

PMCID:: PMC10770074

Abstract Article PDF–1.2M

Select item 1064318619.

Potential modulating effects of Allium mongolicum regel ethanol extract on rumen fermentation and biohydrogenation bacteria of dairy cows in vitro

XiaoYuan Wang, Chen Bai, Khas Erdene, Ashraf Muhammad Umair, QiNa Cao, ChangJin Ao, LinShu Jiang

Front Microbiol. 2023; 14: 1272691. Published online 2023 Oct 30. doi: 10.3389/fmicb.2023.1272691

PMCID:: PMC10643186

Abstract Article PDF–540K

Select item 972314020.

Gut microbiota profile of COVID-19 patients: Prognosis and risk stratification (MicroCOVID-19 study)

José Guilherme Nobre, Mariana Delgadinho, Carina Silva, Joana Mendes, Vanessa Mateus, Edna Ribeiro, Diogo Alpuim Costa, Miguel Lopes, Ana Isabel Pedroso, Frederico Trigueiros, Maria Inês Rodrigues, Cristina Lino de Sousa, Miguel Brito

Front Microbiol. 2022; 13: 1035422. Published online 2022 Nov 22. doi: 10.3389/fmicb.2022.1035422