txid214851[Organism:exp] - PMC

Telmo Blasco, Francesco Balzerani, Luis V Valcárcel, Pedro Larrañaga, Concha Bielza, María Pilar Francino, José Ángel Rufián-Henares, Francisco J Planes, Sergio Pérez-Burillo

Bioinformatics. 2024 May; 40(5): btae266. Published online 2024 Apr 30. doi: 10.1093/bioinformatics/btae266

PMCID:: PMC11082422

Abstract Article PDF–3.7M

Select item 109961034.

Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude

Yang Han, Xiaoshuang Liu, Qian Jia, Jiayu Xu, Jinlong Shi, Xiang Li, Guotong Xie, Xiaojing Zhao, Kunlun He

Microbiome. 2024; 12: 70. Published online 2024 Apr 5. doi: 10.1186/s40168-024-01781-5

PMCID:: PMC10996103

Abstract Article PDF–7.0M

Select item 110364025.

Exploring the Preventive and Therapeutic Mechanisms of Probiotics in Chronic Kidney Disease through the Gut–Kidney Axis

Hsiao-Wen Huang, Ming-Ju Chen

J Agric Food Chem. 2024 Apr 17; 72(15): 8347–8364. Published online 2024 Apr 4. doi: 10.1021/acs.jafc.4c00263

PMCID:: PMC11036402

Abstract Article PDF–1.4M

Select item 109622986.

Oral and gut microbial profiling in periodontitis and Parkinson’s disease

Ekin Yay, Melis Yilmaz, Hilal Toygar, Nur Balci, Carla Alvarez Rivas, Basak Bolluk Kılıç, Ali Zirh, Bruce J. Paster, Alpdogan Kantarci

J Oral Microbiol. 2024; 16(1): 2331264. Published online 2024 Mar 21. doi: 10.1080/20002297.2024.2331264

PMCID:: PMC10962298

Abstract Article PDF–9.3M

Select item 107651137.

Differential cytokine profiling and microbial species involved in cecal microbiota modulations in SPF chicks immunized with a dual vaccine against Salmonella Typhimurium infection

Tong-Rong Jan, Chen-Si Lin, Wen-Yuan Yang

Poult Sci. 2024 Feb; 103(2): 103334. Published online 2023 Nov 30. doi: 10.1016/j.psj.2023.103334

PMCID:: PMC10765113

Abstract Article PDF–2.8M

Select item 106649628.

Clinical performance study of a fecal bacterial signature test for colorectal cancer screening

Marta Malagón, Elizabeth Alwers, Lia Oliver, Sara Ramió-Pujol, Mireia Sánchez-Vizcaino, Joan Amoedo, Salomé de Cambra, Mariona Serra-Pagès, Antoni Castells, Xavier Aldeguer, Jesús Garcia-Gil, Hermann Brenner

PLoS One. 2023; 18(11): e0293678. Published online 2023 Nov 22. doi: 10.1371/journal.pone.0293678

PMCID:: PMC10664962

Abstract Article PDF–523K

Select item 105977049.

Identification of acacia gum fermenting bacteria from pooled human feces using anaerobic enrichment culture

Muhamad Hanif Rawi, Hui Yan Tan, Shahrul Razid Sarbini

Front Microbiol. 2023; 14: 1245042. Published online 2023 Oct 10. doi: 10.3389/fmicb.2023.1245042

PMCID:: PMC10597704

Abstract Article PDF–1007K

Select item 1047262510.

Combined effect of microbially derived cecal SCFA and host genetics on feed efficiency in broiler chickens

Zhengxiao He, Ranran Liu, Mengjie Wang, Qiao Wang, Jumei Zheng, Jiqiang Ding, Jie Wen, Alan G. Fahey, Guiping Zhao

Microbiome. 2023; 11: 198. Published online 2023 Sep 1. doi: 10.1186/s40168-023-01627-6

PMCID:: PMC10472625

Abstract Article PDF–2.4M

Select item 1043662311.

Short-chain fatty acids in diseases

Dan Zhang, Yong-Ping Jian, Yu-Ning Zhang, Yao Li, Li-Ting Gu, Hui-Hui Sun, Ming-Di Liu, Hong-Lan Zhou, Yi-Shu Wang, Zhi-Xiang Xu

Cell Commun Signal. 2023; 21: 212. Published online 2023 Aug 18. doi: 10.1186/s12964-023-01219-9

PMCID:: PMC10436623

Abstract Article PDF–2.5M

Select item 1094802512.

Mapping the T cell repertoire to a complex gut bacterial community

Kazuki Nagashima, Aishan Zhao, Katayoon Atabakhsh, Minwoo Bae, Jamie E. Blum, Allison Weakley, Sunit Jain, Xiandong Meng, Alice G. Cheng, Min Wang, Steven Higginbottom, Alex Dimas, Pallavi Murugkar, Elizabeth S. Sattely, James J. Moon, Emily P. Balskus, Michael A. Fischbach

Nature. Author manuscript; available in PMC 2024 Mar 18.

Published in final edited form as: Nature. 2023 Sep; 621(7977): 162–170. Published online 2023 Aug 16. doi: 10.1038/s41586-023-06431-8

PMCID:: PMC10948025

Abstract Article PDF–7.2M

Select item 1037402113.

Development of culture methods capable of culturing a wide range of predominant species of intestinal bacteria

Rika Hirano, Izumi Nishita, Riho Nakai, Ayaka Bito, Ryunosuke Sasabe, Shin Kurihara

Front Cell Infect Microbiol. 2023; 13: 1056866. Published online 2023 Jul 13. doi: 10.3389/fcimb.2023.1056866

PMCID:: PMC10374021

Abstract Article PDF–2.7M

Select item 1034158414.

Phage Targeting Neonatal Meningitis E. coli K1 In Vitro in the Intestinal Microbiota of Pregnant Donors and Impact on Bacterial Populations

Céline Antoine, Fanny Laforêt, Elizabeth Goya-Jorge, Irma Gonza, Sarah Lebrun, Caroline Douny, Jean-Noël Duprez, Abdoulaye Fall, Bernard Taminiau, Marie-Louise Scippo, Georges Daube, Damien Thiry, Véronique Delcenserie

Int J Mol Sci. 2023 Jul; 24(13): 10580. Published online 2023 Jun 24. doi: 10.3390/ijms241310580

PMCID:: PMC10341584

Abstract Article PDF–15M

Select item 1029981615.

Strain dropouts reveal interactions that govern the metabolic output of the gut microbiome

Min Wang, Lucas J. Osborn, Sunit Jain, Xiandong Meng, Allison Weakley, Jia Yan, William J. Massey, Venkateshwari Varadharajan, Anthony Horak, Rakhee Banerjee, Daniela S. Allende, Ricky E. Chan, Adeline M. Hajjar, Zeneng Wang, Alejandra Dimas, Aishan Zhao, Kazuki Nagashima, Alice G. Cheng, Steven Higginbottom, Stanley Hazen, J. Mark Brown, Michael A. Fischbach

Cell. Author manuscript; available in PMC 2024 Jun 22.

Published in final edited form as: Cell. 2023 Jun 22; 186(13): 2839–2852.e21. doi: 10.1016/j.cell.2023.05.037

PMCID:: PMC10299816

Abstract Article PDF–3.3M

Select item 1026722216.

Culturing of a complex gut microbial community in mucin-hydrogel carriers reveals strain- and gene-associated spatial organization

Xiaofan Jin, Feiqiao B. Yu, Jia Yan, Allison M. Weakley, Veronika Dubinkina, Xiandong Meng, Katherine S. Pollard

Nat Commun. 2023; 14: 3510. Published online 2023 Jun 14. doi: 10.1038/s41467-023-39121-0

PMCID:: PMC10267222

Abstract Article PDF–2.4M

Select item 1022391117.

Characteristic Gut Bacteria in High Barley Consuming Japanese Individuals without Hypertension

Satoko Maruyama, Tsubasa Matsuoka, Koji Hosomi, Jonguk Park, Mao Nishimura, Haruka Murakami, Kana Konishi, Motohiko Miyachi, Hitoshi Kawashima, Kenji Mizuguchi, Toshiki Kobayashi, Tadao Ooka, Zentaro Yamagata, Jun Kunisawa

Microorganisms. 2023 May; 11(5): 1246. Published online 2023 May 9. doi: 10.3390/microorganisms11051246

PMCID:: PMC10223911

Abstract Article PDF–941K

Select item 1016577818.

Gut microbiome transitions across generations in different ethnicities in an urban setting—the HELIUS study

Eduard W. J. van der Vossen, Mark Davids, Lucas R. F. Bresser, Henrike Galenkamp, Bert-Jan H. van den Born, Aeilko H. Zwinderman, Evgeni Levin, Max Nieuwdorp, Marcus C. de Goffau

Microbiome. 2023; 11: 99. Published online 2023 May 8. doi: 10.1186/s40168-023-01488-z

PMCID:: PMC10165778

Abstract Article PDF–6.6M

Select item 1013224319.

Microbial metabolites in colorectal tumorigenesis and cancer therapy

Yali Liu, Harry Cheuk-Hay Lau, Jun Yu

Gut Microbes. 2023; 15(1): 2203968. Published online 2023 Apr 24. doi: 10.1080/19490976.2023.2203968

PMCID:: PMC10132243

Abstract Article PDF–1.5M

Select item 1027614520.

Effects of indoor and outdoor rearing system on geese biochemical parameters and cecal microbial composition

Yuan-Yu Lin, Pei-En Chang, Shih-Yi Shen, Sheng-Der Wang

Poult Sci. 2023 Aug; 102(8): 102731. Published online 2023 Apr 20. doi: 10.1016/j.psj.2023.102731

PMCID:: PMC10276145

Abstract Article PDF–2.0M

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