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Select item 110712131.

Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome

Georgi K. Marinov, Xinyi Chen, Matthew P. Swaffer, Tingting Xiang, Arthur R. Grossman, William J. Greenleaf

Genome Biol. 2024; 25: 115. Published online 2024 May 6. doi: 10.1186/s13059-024-03261-3

PMCID:: PMC11071213

Abstract Article PDF–5.5M

Select item 109966172.

The Evolutionary Origins and Ancestral Features of Septins

Samed Delic, Brent Shuman, Shoken Lee, Shirin Bahmanyar, Michelle Momany, Masayuki Onishi

Version 1. bioRxiv. Preprint. 2024 Mar 27. doi: 10.1101/2024.03.25.586683

Published in:: Front Cell Dev Biol. 2024; 12: 1406966.

PMCID:: PMC10996617

Abstract Article PDF–8.6M

Select item 109653263.

Synergistic response to climate stressors in coral is associated with genotypic variation in baseline expression

Jenna Dilworth, Wyatt C. Million, Maria Ruggeri, Emily R. Hall, Ashley M. Dungan, Erinn M. Muller, Carly D. Kenkel

Proc Biol Sci. 2024 Mar; 291(2019): 20232447. Published online March 27, 2024. doi: 10.1098/rspb.2023.2447

PMCID:: PMC10965326

Abstract Article PDF–938K

Select item 109155004.

Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies

Eiichi Shoguchi, Masanobu Kawachi, Chuya Shinzato, Girish Beedessee

Environ Microbiol Rep. 2024 Apr; 16(2): e13238. Published online 2024 Mar 5. doi: 10.1111/1758-2229.13238

PMCID:: PMC10915500

Abstract Article PDF–4.7M

Select item 109111935.

Comparative physiology reveals heat stress disrupts acid–base homeostasis independent of symbiotic state in the model cnidarian Exaiptasia diaphana

Luella R. Allen-Waller, Katelyn G. Jones, Marcelina P. Martynek, Kristen T. Brown, Katie L. Barott

J Exp Biol. 2024 Feb 15; 227(4): jeb246222. Published online 2024 Feb 22. doi: 10.1242/jeb.246222

PMCID:: PMC10911193

Abstract Article

Select item 106649816.

What makes a winner? Symbiont and host dynamics determine Caribbean octocoral resilience to bleaching

Mary Alice Coffroth, Louis A. Buccella, Katherine M. Eaton, Howard R. Lasker, Alyssa T. Gooding, Harleena Franklin

Sci Adv. 2023 Nov 24; 9(47): eadj6788. Published online 2023 Nov 22. doi: 10.1126/sciadv.adj6788

PMCID:: PMC10664981

Abstract Article PDF–1019K

Select item 106315467.

Does depth divide? Variable genetic connectivity patterns among shallow and mesophotic Montastraea cavernosa coral populations across the Gulf of Mexico and western Caribbean

Alexis B. Sturm, Ryan J. Eckert, Ashley M. Carreiro, Allison M. Klein, Michael S. Studivan, Danielle Dodge Farelli, Nuno Simões, Patricia González‐Díaz, Juliett González Méndez, Joshua D. Voss

Ecol Evol. 2023 Nov; 13(11): e10622. Published online 2023 Nov 8. doi: 10.1002/ece3.10622

PMCID:: PMC10631546

Abstract Article PDF–7.2M

Select item 106117278.

Coral endosymbiont growth is enhanced by metabolic interactions with bacteria

Jennifer L. Matthews, Abeeha Khalil, Nachshon Siboni, Jeremy Bougoure, Paul Guagliardo, Unnikrishnan Kuzhiumparambil, Matthew DeMaere, Nine M. Le Reun, Justin R. Seymour, David J. Suggett, Jean-Baptiste Raina

Nat Commun. 2023; 14: 6864. Published online 2023 Oct 27. doi: 10.1038/s41467-023-42663-y

PMCID:: PMC10611727

Abstract Article PDF–1.4M

Select item 105684139.

Protocol for the generation of Symbiodiniaceae mutants using UV mutagenesis

Joseph A. Russo, Tingting Xiang, Robert E. Jinkerson

STAR Protoc. 2023 Dec 15; 4(4): 102627. Published online 2023 Oct 3. doi: 10.1016/j.xpro.2023.102627

PMCID:: PMC10568413

Abstract Article PDF–3.5M

Select item 1054110310.

Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome

Georgi K. Marinov, Xinyi Chen, Matthew P. Swaffer, Tingting Xiang, Arthur R. Grossman, William J. Greenleaf

Version 1. bioRxiv. Preprint. 2023 Sep 22. doi: 10.1101/2023.09.18.558303

Published in:: Genome Biol. 2024; 25: 115.

PMCID:: PMC10541103

Abstract Article PDF–7.7M

Select item 1052545511.

OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors

Alice Roussel, Vincent Mériot, Thierry Jauffrais, Véronique Berteaux-Lecellier, Nicolas Lebouvier

Biology (Basel) 2023 Sep; 12(9): 1234. Published online 2023 Sep 13. doi: 10.3390/biology12091234

PMCID:: PMC10525455

Abstract Article PDF–756K

Select item 1037601112.

Symbiont Identity Impacts the Microbiome and Volatilome of a Model Cnidarian-Dinoflagellate Symbiosis

Maggie Wuerz, Caitlin A. Lawson, Clinton A. Oakley, Malcolm Possell, Shaun P. Wilkinson, Arthur R. Grossman, Virginia M. Weis, David J. Suggett, Simon K. Davy

Biology (Basel) 2023 Jul; 12(7): 1014. Published online 2023 Jul 17. doi: 10.3390/biology12071014

PMCID:: PMC10376011

Abstract Article PDF–2.6M

Select item 1028704013.

Shaping eukaryotic epigenetic systems by horizontal gene transfer

Irina R. Arkhipova, Irina A. Yushenova, Fernando Rodriguez

Bioessays. Author manuscript; available in PMC 2024 Jul 1.

Published in final edited form as: Bioessays. 2023 Jul; 45(7): e2200232. doi: 10.1002/bies.202200232

PMCID:: PMC10287040

Abstract Article PDF–1.5M

Select item 1023512414.

Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes

Alex J. Veglia, Kalia S. I. Bistolas, Christian R. Voolstra, Benjamin C. C. Hume, Hans-Joachim Ruscheweyh, Serge Planes, Denis Allemand, Emilie Boissin, Patrick Wincker, Julie Poulain, Clémentine Moulin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Sylvain Agostini, Bernard Banaigs, Emmanuel Boss, Chris Bowler, Colomban de Vargas, Eric Douville, Michel Flores, Didier Forcioli, Paola Furla, Pierre E. Galand, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Shinichi Sunagawa, Olivier P. Thomas, Romain Troublé, Didier Zoccola, Adrienne M. S. Correa, Rebecca L. Vega Thurber

Commun Biol. 2023; 6: 566. Published online 2023 Jun 1. doi: 10.1038/s42003-023-04917-9

PMCID:: PMC10235124

Abstract Article PDF–3.4M

Select item 1030120115.

Coral Lipidome: Molecular Species of Phospholipids, Glycolipids, Betaine Lipids, and Sphingophosphonolipids

Tatyana V. Sikorskaya

Mar Drugs. 2023 Jun; 21(6): 335. Published online 2023 May 30. doi: 10.3390/md21060335

PMCID:: PMC10301201

Abstract Article PDF–3.0M

Select item 1001704416.

Molecular insights into the Darwin paradox of coral reefs from the sea anemone Aiptasia

Guoxin Cui, Migle K. Konciute, Lorraine Ling, Luke Esau, Jean-Baptiste Raina, Baoda Han, Octavio R. Salazar, Jason S. Presnell, Nils Rädecker, Huawen Zhong, Jessica Menzies, Phillip A. Cleves, Yi Jin Liew, Cory J. Krediet, Val Sawiccy, Maha J. Cziesielski, Paul Guagliardo, Jeremy Bougoure, Mathieu Pernice, Heribert Hirt, Christian R. Voolstra, Virginia M. Weis, John R. Pringle, Manuel Aranda

Sci Adv. 2023 Mar; 9(11): eadf7108. Published online 2023 Mar 15. doi: 10.1126/sciadv.adf7108

PMCID:: PMC10017044

Abstract Article PDF–1.0M

Select item 1005593617.

Oleaginous Heterotrophic Dinoflagellates—Crypthecodiniaceae

Alvin Chun Man Kwok, Stanley Ping Chuen Law, Joseph Tin Yum Wong

Mar Drugs. 2023 Mar; 21(3): 162. Published online 2023 Feb 28. doi: 10.3390/md21030162

PMCID:: PMC10055936

Abstract Article PDF–6.9M

Select item 988422918.

A candidate transporter allowing symbiotic dinoflagellates to feed their coral hosts

Keren Maor-Landaw, Marion Eisenhut, Giada Tortorelli, Allison van de Meene, Samantha Kurz, Gabriela Segal, Madeleine J. H. van Oppen, Andreas P. M. Weber, Geoffrey I. McFadden

ISME Commun. 2023; 3: 7. Published online 2023 Jan 28. doi: 10.1038/s43705-023-00218-8

PMCID:: PMC9884229

Abstract Article PDF–2.0M

Select item 990935919.

Genomic conservation and putative downstream functionality of the phosphatidylinositol signalling pathway in the cnidarian-dinoflagellate symbiosis

Immy A. Ashley, Sheila A. Kitchen, Lucy M. Gorman, Arthur R. Grossman, Clinton A. Oakley, David J. Suggett, Virginia M. Weis, Sabrina L. Rosset, Simon K. Davy

Front Microbiol. 2022; 13: 1094255. Published online 2023 Jan 26. doi: 10.3389/fmicb.2022.1094255

PMCID:: PMC9909359

Abstract Article PDF–10M

Select item 986130620.

DNA Methylation in Algae and Its Impact on Abiotic Stress Responses

Michele Ferrari, Antonella Muto, Leonardo Bruno, Radiana Cozza

Plants (Basel) 2023 Jan; 12(2): 241. Published online 2023 Jan 5. doi: 10.3390/plants12020241

PMCID:: PMC9861306

Abstract Article PDF–670K

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