txid272631[Organism:noexp] - PMC

Abigail Manson McGuire, Brian Weiner, Sang Tae Park, Ilan Wapinski, Sahadevan Raman, Gregory Dolganov, Matthew Peterson, Robert Riley, Jeremy Zucker, Thomas Abeel, Jared White, Peter Sisk, Christian Stolte, Mike Koehrsen, Robert T Yamamoto, Milena Iacobelli-Martinez, Matthew J Kidd, Andreia M Maer, Gary K Schoolnik, Aviv Regev, James Galagan

BMC Genomics. 2012; 13: 120. Published online 2012 Mar 28. doi: 10.1186/1471-2164-13-120

PMCID:: PMC3388012

Abstract Article PDF–3.6M

Select item 30896134.

Comparative Genomics of Cell Envelope Components in Mycobacteria

Ruma Banerjee, Pankaj Vats, Sonal Dahale, Sunitha Manjari Kasibhatla, Rajendra Joshi

PLoS One. 2011; 6(5): e19280. Published online 2011 May 6. doi: 10.1371/journal.pone.0019280

PMCID:: PMC3089613

Abstract Article PDF–1.0M

Select item 30935445.

Phylogenetic Distribution and Evolutionary History of Bacterial DEAD-Box Proteins

Varinia López-Ramírez, Luis D. Alcaraz, Gabriel Moreno-Hagelsieb, Gabriela Olmedo-Álvarez

J Mol Evol. 2011; 72(4): 413–431. Published online 2011 Mar 25. doi: 10.1007/s00239-011-9441-8

PMCID:: PMC3093544

Abstract Article PDF–9.0M

Select item 25961446.

Matching curated genome databases: a non trivial task

Stéphane Descorps-Declère, Matthieu Barba, Bernard Labedan

BMC Genomics. 2008; 9: 501. Published online 2008 Oct 24. doi: 10.1186/1471-2164-9-501

PMCID:: PMC2596144

Abstract Article PDF–555K

Select item 25165227.

Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli

Marcelo M Zerillo, Marie-Anne Van Sluys, Luis Eduardo A Camargo, Claudia B Monteiro-Vitorello

BMC Microbiol. 2008; 8: 127. Published online 2008 Jul 25. doi: 10.1186/1471-2180-8-127

PMCID:: PMC2516522

Abstract Article PDF–805K

Select item 23749868.

RASTA-Bacteria: a web-based tool for identifying toxin-antitoxin loci in prokaryotes

Emeric W Sevin, Frédérique Barloy-Hubler

Genome Biol. 2007; 8(8): R155. Published online 2007 Aug 1. doi: 10.1186/gb-2007-8-8-r155

PMCID:: PMC2374986

Abstract Article PDF–1.9M

Select item 18523169.

Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12

Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa Ensman, Frank Stanley, Michael Trelinski, Peter Ortoleva

Algorithms Mol Biol. 2007; 2: 2. Published online 2007 Mar 30. doi: 10.1186/1748-7188-2-2

PMCID:: PMC1852316

Abstract Article PDF–707K

Select item 143593610.

GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes

Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yoichi Nakayama, Masaru Tomita

BMC Bioinformatics. 2006; 7: 168. Published online 2006 Mar 23. doi: 10.1186/1471-2105-7-168

PMCID:: PMC1435936

Abstract Article PDF–525K

Select item 849373011.

Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes

Saskia Pfrengle, Judith Neukamm, Meriam Guellil, Marcel Keller, Martyna Molak, Charlotte Avanzi, Alena Kushniarevich, Núria Montes, Gunnar U. Neumann, Ella Reiter, Rezeda I. Tukhbatova, Nataliya Y. Berezina, Alexandra P. Buzhilova, Dmitry S. Korobov, Stian Suppersberger Hamre, Vitor M. J. Matos, Maria T. Ferreira, Laura González-Garrido, Sofia N. Wasterlain, Célia Lopes, Ana Luisa Santos, Nathalie Antunes-Ferreira, Vitória Duarte, Ana Maria Silva, Linda Melo, Natasa Sarkic, Lehti Saag, Kristiina Tambets, Philippe Busso, Stewart T. Cole, Alexei Avlasovich, Charlotte A. Roberts, Alison Sheridan, Craig Cessford, John Robb, Johannes Krause, Christiana L. Scheib, Sarah A. Inskip, Verena J. Schuenemann

BMC Biol. 2021; 19: 220. Published online 2021 Oct 5. doi: 10.1186/s12915-021-01120-2

PMCID:: PMC8493730

Abstract Article PDF–2.2M

Select item 828081912.

Redox homeostasis in Mycobacterium tuberculosis is modulated by a novel actinomycete‐specific transcription factor

Mehak Zahoor Khan, Biplab Singha, Mohammad Farhan Ali, Khushman Taunk, Srikanth Rapole, Samudrala Gourinath, Vinay Kumar Nandicoori

EMBO J. 2021 Jul 15; 40(14): e106111. Published online 2021 May 21. doi: 10.15252/embj.2020106111

PMCID:: PMC8280819

Abstract Article PDF–4.1M

Select item 793812213.

Information theoretic perspective on genome clustering

Alaguraj Veluchamy, Preeti Mehta, K.V. Srividhya, Hirendra Vikram, M.K. Govind, Ramneek Gupta, Abdul Aziz Bin Dukhyil, Raed Abdullah Alharbi, Saleh Abdullah Aloyuni, Mohamed M. Hassan, S. Krishnaswamy

Saudi J Biol Sci. 2021 Mar; 28(3): 1867–1889. Published online 2020 Dec 31. doi: 10.1016/j.sjbs.2020.12.039

PMCID:: PMC7938122

Abstract Article PDF–1.5M

Select item 650887114.

Dual RNA-Seq of Human Leprosy Lesions Identifies Bacterial Determinants Linked to Host Immune Response

Dennis J. Montoya, Priscila Andrade, Bruno J.A. Silva, Rosane M.B. Teles, Feiyang Ma, Bryan Bryson, Saheli Sadanand, Teia Noel, Jing Lu, Euzenir Sarno, Kristine B. Arnvig, Douglas Young, Ramanuj Lahiri, Diana L. Williams, Sarah Fortune, Barry R. Bloom, Matteo Pellegrini, Robert L. Modlin

Cell Rep. Author manuscript; available in PMC 2019 May 9.

Published in final edited form as: Cell Rep. 2019 Mar 26; 26(13): 3574–3585.e3. doi: 10.1016/j.celrep.2019.02.109