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Select item 110142621.

Evolution of microRNAs in Amoebozoa and implications for the origin of multicellularity

Bart Edelbroek, Jonas Kjellin, Inna Biryukova, Zhen Liao, Torgny Lundberg, Angelika A Noegel, Ludwig Eichinger, Marc R Friedländer, Fredrik Söderbom

Nucleic Acids Res. 2024 Apr 12; 52(6): 3121–3136. Published online 2024 Feb 20. doi: 10.1093/nar/gkae109

PMCID:: PMC11014262

Abstract Article PDF–1.7M

Select item 106081422.

To the Origin of Fungi: Analysis of MFS Transporters of First Assembled Aphelidium Genome Highlights Dissimilarity of Osmotrophic Abilities between Aphelida and Fungi

Igor R. Pozdnyakov, Evgeniy V. Potapenko, Elena S. Nassonova, Vladislav V. Babenko, Daria I. Boldyreva, Victoria S. Tcvetkova, Sergey A. Karpov

J Fungi (Basel) 2023 Oct; 9(10): 1021. Published online 2023 Oct 16. doi: 10.3390/jof9101021

PMCID:: PMC10608142

Abstract Article PDF–3.8M

Select item 100117253.

Katnip is needed to maintain microtubule function and lysosomal delivery to autophagosomes and phagosomes

Georgina P. Starling, Ben A. Phillips, Sahana Ganesh, Jason S. King

Mol Biol Cell. 2023 Mar 1; 34(3): ar12. Published online 2023 Feb 21. doi: 10.1091/mbc.E22-02-0063

PMCID:: PMC10011725

Abstract Article PDF–1.9M

Select item 89230234.

Interactome and evolutionary conservation of Dictyostelid small GTPases and their direct regulators

Gillian Forbes, Christina Schilde, Hajara Lawal, Koryu Kin, Qingyou Du, Zhi-hui Chen, Francisco Rivero, Pauline Schaap

Small GTPases. 2022; 13(1): 239–254. Published online 2021 Oct 5. doi: 10.1080/21541248.2021.1984829

PMCID:: PMC8923023

Abstract Article PDF–4.6M

Select item 86847595.

Forty-five years of cGMP research in Dictyostelium: understanding the regulation and function of the cGMP pathway for cell movement and chemotaxis

Peter J. M. van Haastert, Ineke Keizer-Gunnink, Henderikus Pots, Claudia Ortiz-Mateos, Douwe Veltman, Wouter van Egmond, Arjan Kortholt

Mol Biol Cell. 2021 Oct 1; 32(20): ar8. doi: 10.1091/mbc.E21-04-0171

PMCID:: PMC8684759

Abstract Article PDF–2.2M

Select item 82020226.

Host-Parasite Interaction of Atlantic salmon (Salmo salar) and the Ectoparasite Neoparamoeba perurans in Amoebic Gill Disease

Natasha A. Botwright, Amin R. Mohamed, Joel Slinger, Paula C. Lima, James W. Wynne

Front Immunol. 2021; 12: 672700. Published online 2021 May 31. doi: 10.3389/fimmu.2021.672700

PMCID:: PMC8202022

Abstract Article PDF–14M

Select item 79105597.

Voltage-gated proton channels from fungi highlight role of peripheral regions in channel activation

Chang Zhao, Francesco Tombola

Commun Biol. 2021; 4: 261. Published online 2021 Feb 26. doi: 10.1038/s42003-021-01792-0

PMCID:: PMC7910559

Abstract Article PDF–2.3M

Select item 76925688.

Comparative Transcriptome Analysis Reveals the Mechanism Related to Fluazinam Stress of Panonychus citri (Acarina: Tetranychidae)

Yi Shang, Yanbo Wang, Jianyu Deng, Xunyue Liu, Yihao Fang, Qiong Rao, Huiming Wu

Insects. 2020 Nov; 11(11): 730. Published online 2020 Oct 26. doi: 10.3390/insects11110730

PMCID:: PMC7692568

Abstract Article PDF–1004K

Select item 73361849.

Sequence Compression Benchmark (SCB) database—A comprehensive evaluation of reference-free compressors for FASTA-formatted sequences

Kirill Kryukov, Mahoko Takahashi Ueda, So Nakagawa, Tadashi Imanishi

Gigascience. 2020 Jul; 9(7): giaa072. Published online 2020 Jul 6. doi: 10.1093/gigascience/giaa072

PMCID:: PMC7336184

Abstract Article PDF–674K

Select item 803224910.

The proppin Bcas3 and its interactor KinkyA localize to the early phagophore and regulate autophagy

Yoko Yamada, Pauline Schaap

Autophagy. 2021; 17(3): 640–655. Published online 2020 Mar 1. doi: 10.1080/15548627.2020.1725403

PMCID:: PMC8032249

Abstract Article PDF–7.3M

Select item 687347611.

Phylogeny-wide conservation and change in developmental expression, cell-type specificity and functional domains of the transcriptional regulators of social amoebas

Gillian Forbes, Zhi-hui Chen, Koryu Kin, Hajara M. Lawal, Christina Schilde, Yoko Yamada, Pauline Schaap

BMC Genomics. 2019; 20: 890. Published online 2019 Nov 21. doi: 10.1186/s12864-019-6239-3

PMCID:: PMC6873476

Abstract Article PDF–2.9M

Select item 671329912.

Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis

Lu Li, Anastasiya Lavell, Xiangxiang Meng, Oliver Berkowitz, Jennifer Selinski, Allison van de Meene, Chris Carrie, Christoph Benning, James Whelan, Inge De Clercq, Yan Wang

Plant Cell. 2019 Aug; 31(8): 1856–1878. Published online 2019 May 22. doi: 10.1105/tpc.18.00885

PMCID:: PMC6713299

Abstract Article PDF–3.9M

Select item 645843413.

Dictyostelid Cellular Slime Molds from Christmas Island, Indian Ocean

Pu Liu, Yue Zou, Wenxiu Li, Yu Li, Xinru Li, Songhao Che, Steven L. Stephenson

mSphere. 2019 Mar-Apr; 4(2): e00133-19. Published online 2019 Apr 10. doi: 10.1128/mSphere.00133-19

PMCID:: PMC6458434

Abstract Article PDF–6.1M

Select item 632704814.

Two new species of dictyostelid cellular slime molds in high-elevation habitats on the Qinghai-Tibet Plateau, China

Pu Liu, Yue Zou, Shu Li, Steven L. Stephenson, Qi Wang, Yu Li

Sci Rep. 2019; 9: 5. Published online 2019 Jan 9. doi: 10.1038/s41598-018-37896-7

PMCID:: PMC6327048

Abstract Article PDF–3.4M

Select item 630009915.

Comparative genomics of HORMA domain-containing proteins in prokaryotes and eukaryotes

Zainab M. Almutairi

Cell Cycle. 2018; 17(23): 2531–2546. Published online 2018 Dec 4. doi: 10.1080/15384101.2018.1553402

PMCID:: PMC6300099

Abstract Article PDF–3.6M

Select item 588966016.

Diversification of AID/APOBEC-like deaminases in metazoa: multiplicity of clades and widespread roles in immunity

Arunkumar Krishnan, Lakshminarayan M. Iyer, Stephen J. Holland, Thomas Boehm, L. Aravind

Proc Natl Acad Sci U S A. 2018 Apr 3; 115(14): E3201–E3210. Published online 2018 Mar 19. doi: 10.1073/pnas.1720897115

PMCID:: PMC5889660

Abstract Article PDF–1.7M

Select item 528274117.

Improved annotation with de novo transcriptome assembly in four social amoeba species

Reema Singh, Hajara M. Lawal, Christina Schilde, Gernot Glöckner, Geoffrey J. Barton, Pauline Schaap, Christian Cole

BMC Genomics. 2017; 18: 120. Published online 2017 Jan 31. doi: 10.1186/s12864-017-3505-0

PMCID:: PMC5282741

Abstract Article PDF–2.1M

Select item 509743318.

A set of genes conserved in sequence and expression traces back the establishment of multicellularity in social amoebae

Christina Schilde, Hajara M. Lawal, Angelika A. Noegel, Ludwig Eichinger, Pauline Schaap, Gernot Glöckner

BMC Genomics. 2016; 17: 871. Published online 2016 Nov 4. doi: 10.1186/s12864-016-3223-z

PMCID:: PMC5097433

Abstract Article PDF–761K

Select item 371242019.

Analysis of phenotypic evolution in Dictyostelia highlights developmental plasticity as a likely consequence of colonial multicellularity

Maria Romeralo, Anna Skiba, Alejandro Gonzalez-Voyer, Christina Schilde, Hajara Lawal, Sylwia Kedziora, Jim C. Cavender, Gernot Glöckner, Hideko Urushihara, Pauline Schaap

Proc Biol Sci. 2013 Aug 7; 280(1764): 20130976. doi: 10.1098/rspb.2013.0976